| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1508 |
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| Symbol | |
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| ID | 7136700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1308796 |
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| End bp | 1309671 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643529896 |
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| Product | nitrogen fixation protein nifU |
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| Protein accession | YP_002425936 |
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| Protein GI | 218667946 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
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| TIGRFAM ID | [TIGR02000] Fe-S cluster assembly protein NifU |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.63468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGGATT ATACCGATAA AGTCAAGGAT TACTTCTTCA ACCCCAAGAA TACCGGGGTC
CTCGAAGAGG CCAATGCGGT CGGCGAGGTC GGCTCCATCA GTTGCGGAGA TGCCCTACGC
CTGATGCTCA AGGTAGACCC GGATACGGAT GTCATCCTGG ATGCCCGATT CCAGACGTTT
GGCTGCGGCT CCGCCATCGC CTCGTCATCG GCCTTGACGG AACTGATCAA GGGCAAGACA
CTGGATGAAG CGCTCAAAAT CACCAATCAG GACATCGCTG AATTTTTGGG TGGGCTTCCT
CCGGAGAAAA TGCATTGTTC CGTCATGGGC GCGGAGGCCC TGCATGCCGC TATCGCCAAT
TACCGCGGCG AAGATTGGGC AGATGATCAC GAAGAAGGCG CGCTGGTATG TAAATGCTTC
GCCATCGACT CGGCGCTCAT TGAGAAGGTG GCCAGGGAAA ACCATTTGTC GACGGTCGAA
GAGATCACTT TCTATACCAA GGCGGGCGGC GGTTGCCAGA GCTGCCATGA GCAGATCGAG
GATATCCTCG CGGCAGTAAA CGGCAGCGCG CCGCTACCGG TGGTGGCCGC GAAACCCACC
GCAAAACCCG CCCCGGCACC CATGACCATG GTGCAGAAAA TCCAGAAAAT ATCCGCCGTG
ATCGATGAAA TGCGCCCGCA ATTCCAGATG GATGGCGGCA ATATCGAACT GGTCGATGTG
GATGGTGATA CGGTCATGGT AGCCATGAGC GGCTCGTGCA TGAACTGCCA GTCTTCCGGG
ATCACCATTT CCGGCATCCA GGAGCGCCTG ATGCTGACTC TGGGCCGTCC GGTACGGGTA
GTTCCGGCCA GCATGCCGCA AGCCGTGGGG GCATAG
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| Protein sequence | MWDYTDKVKD YFFNPKNTGV LEEANAVGEV GSISCGDALR LMLKVDPDTD VILDARFQTF
GCGSAIASSS ALTELIKGKT LDEALKITNQ DIAEFLGGLP PEKMHCSVMG AEALHAAIAN
YRGEDWADDH EEGALVCKCF AIDSALIEKV ARENHLSTVE EITFYTKAGG GCQSCHEQIE
DILAAVNGSA PLPVVAAKPT AKPAPAPMTM VQKIQKISAV IDEMRPQFQM DGGNIELVDV
DGDTVMVAMS GSCMNCQSSG ITISGIQERL MLTLGRPVRV VPASMPQAVG A
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