Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1458 |
Symbol | |
ID | 7136482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1259456 |
End bp | 1260565 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643529846 |
Product | pleiotropic regulatory protein, putative |
Protein accession | YP_002425886 |
Protein GI | 218665336 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAA ATACAGCAAT TCCCATGGTC GATTTGCGCG CGCATTTTGC GCCGCTGCGG GATGAAATAT TGACGGGGAT AGGGAAGATT CTGGACGATG CCAGCTTTAT CCTGGGAAAT CAGGGGCGTG CGCTGGAGGC GGAGGTAGCG GGTCTCTCCG GTGTTGCCCA CGGTGTGGGC TGCGCCTCCG GTACGGACGC CCTGATGCTG GCCCTGCGTG CCCTGGAGAT CGGCCCCGGC GACGAGGTGA TCGTCCCGAC CTTCACGTTC ATCGCGACTG CGGAAGCGGT TCTTTACGTG GGCGCCACGC CGGTTTTTGT GGATGTGGAT GATCGTTTTT ACGCCATGAC CATCGCCGGT ATCGAGGCCG CCATTACGCC GCGGACCAAA GCGATCATCC CCGTACATCT CTACGGATTG CCGGCAGATA TGCCCGGCAT CATGGCGCTT GCTCAGAAGC ATGGCTTGCG GGTGATTGAG GATTGTGCCC AGGCCATTGG TGCCCAAATT AACGGACAAG GAGTGGGCAG TTTTGGCGAC ATCGGTTGTT TTTCTTTCTT TCCCAGCAAA AATCTTGGCG CTGCCGGAGA CGGCGGCATG GTGGTGACGG CGGATGCGGA GCTGGAACGC AAATTGCGCG GTCTGCGCAA CCATGGTTCC TGGCAGACCT ACCATCATGA CGTATTGGGC TATAACAGTC GTCTCGACGA AATGCAGGCG GTGATTCTTC GGGCGGAGTT CCCACATCTC GCGGCCTATA ACGACGGACG GCGGCGGGCG GCAGGGTGGT ACGCCGAGCA TCTGGTGGGT CTCGACCTGC AATTGCCGGA AGCTCCAGCA GGTTATCACC ACGTATTCCA TCAGTTCACC ATTCAGTTGA ATGCGCGGGA TGCGGTGAAG ACCGCCCTCC ATGCCGAAGG CATTGCCAGC GCCATTTACT ATCCGATTCC AGGACACCAG CAAAAGATGT TTGCACACCA GGCCCAAACC CATTGTCCGG TGGCAGAGCA TCTGGCGGAG CGGGTGCTCT CCCTGCCCAT GTTCCCGGAA CTGCGTGAGG AGCAGATAGC CAGGATCGCT ACCGTGATCC GTCGCACCCT GCACGGCTAG
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Protein sequence | MTQNTAIPMV DLRAHFAPLR DEILTGIGKI LDDASFILGN QGRALEAEVA GLSGVAHGVG CASGTDALML ALRALEIGPG DEVIVPTFTF IATAEAVLYV GATPVFVDVD DRFYAMTIAG IEAAITPRTK AIIPVHLYGL PADMPGIMAL AQKHGLRVIE DCAQAIGAQI NGQGVGSFGD IGCFSFFPSK NLGAAGDGGM VVTADAELER KLRGLRNHGS WQTYHHDVLG YNSRLDEMQA VILRAEFPHL AAYNDGRRRA AGWYAEHLVG LDLQLPEAPA GYHHVFHQFT IQLNARDAVK TALHAEGIAS AIYYPIPGHQ QKMFAHQAQT HCPVAEHLAE RVLSLPMFPE LREEQIARIA TVIRRTLHG
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