| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1433 |
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| Symbol | rhlE |
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| ID | 7136290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1235720 |
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| End bp | 1236976 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643529821 |
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| Product | ATP-dependent RNA helicase RhlE |
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| Protein accession | YP_002425861 |
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| Protein GI | 218667828 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.858886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCTT TTGAATCTCT GGGCCTTTCT GAGCCTATCT GGCGTGCGGC TGCCGAACGT
GGCTACACCA GTCCCACCCC TATTCAGGAA CAGGCCATCC CGGTAGTCAT GTCCGGTGTC
GATCTGCTGG CGGGTGCACA GACGGGTACC GGCAAGACTG CCGCGTTTGC CATGCCCATC
CTGCACAAAC TGGCGGTTAC CGCAGGTAGT GCGTCACGCG CTCCTTCCAG TGTGCGTGCG
CTGATTCTGG TCCCCACCCG CGAACTGGCG GCGCAGGTGG AGGCGAGCGT GCAGTTGTAC
GGGCGCTATC TTCCCCTGCG CTCCCTGGTG CTCATCGGTG GGGTCAAGAT CAATCCCCAG
ATGCAGAAAC TGCGCCGCAG CGTAGATATC CTGGTAGCCA CCCCCGGTCG CCTGCTGGAT
CATATCCAGC AGCGCAGTGT CGACCTCTCT CACGTCGAAA TTCTGGTGCT CGACGAAGCC
GATCGCATGC TCGACATGGG CTTTATCCGT GACATCCGGC GCATCCTTGC GGTATTGCCG
AAAAAGCGCC AGAACCTGCT GTTCTCGGCG ACGTTTTCGC CGGAAATCCG TGGGCTGGCC
GATGGCCTGT TGAACAACCC GACCAGTGTT GAGGTCGCGG CACGCAATGC CACTGCCGAT
AATGTCGCCC AGCGGGTTTT TGCCGTCGAT CAGGACCGCA AACGCGAGCT TCTTTCCCAT
CTGATCGAAG AACATCAATG GGGGCAGGTG CTGGTTTTCA CTCGTACCAA GCATGGTGCC
GACCGCCTTG CCAGGCACTT ATCGCAGGAT GGCATGCAGG CGATGGCAAT CCACGGCGAT
AAGAGCCAGG GCGCCCGTAC CCGCGCCCTG GCGGAGTTCA AGGAAGGCAA AGTGCAGGTC
CTGGTGGCGA CGGATATCGC CGCTCGCGGT ATCGACATCA GCGAGCTGCC CCACGTGGTG
AACTTTGAAC TTCCTCATGT GCCGGAAGAT TATGTCCATC GTATCGGACG GACCGGTCGC
GCCGGTAACA ACGGCCAGGC CGTATCGCTG GTGAGCAGCG AGGAGCGTAA GCAGTTACAG
GACGTGGAGA AGCTCCTGCG GCGCTCCTTC GACCGGGAGA TCGTCATCGG TTTCGAGCCG
CGGCAGTCTT TCTCCGGTCA TGCACCGTCA GCGGCGGCGC GTCGTCCAGC TCAGGCCGCA
GGGCGAGGTC GGCCCGGTTC AGGAGCGGTG CCTTCGGGTC GTGCCCGCCG CGCCTGA
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| Protein sequence | MSSFESLGLS EPIWRAAAER GYTSPTPIQE QAIPVVMSGV DLLAGAQTGT GKTAAFAMPI
LHKLAVTAGS ASRAPSSVRA LILVPTRELA AQVEASVQLY GRYLPLRSLV LIGGVKINPQ
MQKLRRSVDI LVATPGRLLD HIQQRSVDLS HVEILVLDEA DRMLDMGFIR DIRRILAVLP
KKRQNLLFSA TFSPEIRGLA DGLLNNPTSV EVAARNATAD NVAQRVFAVD QDRKRELLSH
LIEEHQWGQV LVFTRTKHGA DRLARHLSQD GMQAMAIHGD KSQGARTRAL AEFKEGKVQV
LVATDIAARG IDISELPHVV NFELPHVPED YVHRIGRTGR AGNNGQAVSL VSSEERKQLQ
DVEKLLRRSF DREIVIGFEP RQSFSGHAPS AAARRPAQAA GRGRPGSGAV PSGRARRA
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