Gene AFE_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1429 
Symbol 
ID7137002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp1232944 
End bp1233585 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID643529817 
Productcytochrome c552, putative 
Protein accessionYP_002425857 
Protein GI218667453 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCCTG TATTATCATC GAGCCGTTTC GCTCCTTCCC AAAAGAAGGG TGTTATCTGC 
ACTGCCGCCG TAGCGTTGGC GATATTGAGC GCAGGTCCAG CACTGGCGCA GGTGCCACAA 
TCTGTCCATC AGTCATGCAT GATCTGCCAC GGGCAGACCG GCGAAAATAC CATCTATCCG 
ATGGTTCCGC GCCTGAGCGG CCAACAGGTG CAATATCTGG CATGGCAGCT GAAGCAGTTC 
AAGGCGCATA CCCGTGCGGA TCAAAATGCG CAGATTTACA TGTGGCCGGT CGCGCAGGCC 
ATGAGTCAGA AGGAAATCCA GTCGGTTGCG AAGTATTATG CGGCGCAATC GCCCATGCAC 
AGCGCATCCT CGCCACGTCC CGGAGTCTCC GCGGGTAAGC AGATATTCCT GCAGGGGGTC 
GCTGCACAGG GTGTTCCCGC GTGTATGGCC TGCCACGCCG TGAACGCGAC AGGTCGAGGG 
ATATTCCCGC GACTGGCCGG GCAGCGATAT GCATATATCG TTCAGCAGCT AACCTATCTG 
CATGATGGAA ACCGGGTGAA TCCCATCATG CAGCCCGTGG CGGAAAAGCT GACCAACCGG 
CAAATGCGGG AGGTGGCGGC TTATCTGTCC GGTCTGCATT GA
 
Protein sequence
MYPVLSSSRF APSQKKGVIC TAAVALAILS AGPALAQVPQ SVHQSCMICH GQTGENTIYP 
MVPRLSGQQV QYLAWQLKQF KAHTRADQNA QIYMWPVAQA MSQKEIQSVA KYYAAQSPMH 
SASSPRPGVS AGKQIFLQGV AAQGVPACMA CHAVNATGRG IFPRLAGQRY AYIVQQLTYL 
HDGNRVNPIM QPVAEKLTNR QMREVAAYLS GLH