Gene AFE_1364 details

Gene Information

• Locus tag: AFE_1364
• ID: 7137001
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1178442
• End bp: 1178882
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643529759
• Product: hypothetical protein
• Protein accession: YP_002425799
• Protein GI: 218667815
• COG category: [S] Function unknown
• COG ID: [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00320209
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGATG AGACACGACT GGATCGCAGC AGACAGTGGT TTGATGCAGC ATTTGATGAG 
CTAAAAGCCT CTAAAACGCT ATTGGATAAT GGATCTTATG CTCAGTCCTG TTTTTATGCG 
CAACAGTCCG TGGAAAAAGC CATGAAAGGC GTTATGGCCG CCGACGGCAA AGCAATAACC 
ACGCACTCCA TTGCGAAGTT GATGACTAAT CTGCCCCAGG ATAGTCAGCT CGACGATATG 
GAACCCATCC GGCTGGATAA ATTTTATATT CTGACGCGTT ATCCGGAATC TCTGCCGGAA 
GGCGCGAGCA TAAGGCAGAT ATTTGGCAGG CGAGATGCAG AAGACGGCTA TGCCACAGCA 
TCGGGAACTG TACACTTGTT GGCCGGTTGG GCCAAAGAGT TGGGCGTCAC GATTCCTGAA 
CTGACTGAAT CTCCCCACTG A 

 

Protein sequence

MSDETRLDRS RQWFDAAFDE LKASKTLLDN GSYAQSCFYA QQSVEKAMKG VMAADGKAIT 
THSIAKLMTN LPQDSQLDDM EPIRLDKFYI LTRYPESLPE GASIRQIFGR RDAEDGYATA 
SGTVHLLAGW AKELGVTIPE LTESPH