Gene AFE_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1346 
Symbol 
ID7136472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1163445 
End bp1164476 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content40% 
IMG OID643529742 
Productglycosyl transferase, group 2 family protein 
Protein accessionYP_002425782 
Protein GI218666068 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.470467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGA TATTTGAGCA ACATCAGAAA GCGCATGGCC AGAGCCTTAG GGTAAACAAT 
GCAACACCTC AATATACTCT GCCTGTATTG GTTACTGTCA TAGTGACAGT CTACAAGAGA
ACAAAATTTT TAAAGGAGGC AATCGGAAGC GTACTAAACC AAAAATTTCA CAGTTTTGAG
ATTATAGTCA CGGACGATTC AAATAGTGAT GCCGTAATGG CTATATGTGA CTTATTTAAT
AATTCGCAGA TTCGTTATAG GGCGAATTCT GTTGCGCTCG GTGTGGCGCT TAATTTGCGT
GTAGCCATTT CTGAAGCACG TGGTGAATAT ATTGCCATTC TTAATGATGA CGATGTTTGG
GAACCGGATT TCCTAGAAAG TCTTGTGTTT CCGCTTCAAG TAGATTCGGA GATATCTCTT
GCTTTTTGCG ATCATTGGAT TACCTCGGAA GATGGAAGCC TGGATTTATT AAGAACTAAT
GCCAATAGCC TGCATTATGG AAGAGATATT CTGCCCGAAG GTTATATTTA CAATCTCGAA
GAACTGGTCC TCGAAAAAAA TAGTATACCC ATGGCGATGG CGGCTATTTT CAGAAAAAAT
GCGATAGACT TTGGGCTATT AGTTTCGGAT GTGGTTGGAG CTTATGACTT CTGGTTGGCC
TGTTTGTTGG CAGCCTATGG AAGGCCTGCC TATTATGTTT CAAGGAGGTT GACGCGATAC
AGGGTGCACG GGCAAATGGA AACAGTGAGA AAGGCGCCAG ACAAGAATAA GAATATGATA
TATATATACG AAAAGCTAAT TGAATTGAAT TTGTTTCCAA AAAAAATTGA TTTTCTGCAT
AGAAAGTGCA GCAAAAGTTA CTTTCAGGTT GGTAAAGATT ACCTATGGTT TAACAAGTCG
ATATTGGCCA GAAATTATTT CTTTGGGGCT TTCGGGTCTG ATTTAAATTG CAAGGCATTG
CTATACATAG CATTGAGCTA CCTGCCTAGA AATTTTCGCA ACGTGTTGAA AATTACCGCA
TATGGTTTGT GA
 
Protein sequence
MNTIFEQHQK AHGQSLRVNN ATPQYTLPVL VTVIVTVYKR TKFLKEAIGS VLNQKFHSFE 
IIVTDDSNSD AVMAICDLFN NSQIRYRANS VALGVALNLR VAISEARGEY IAILNDDDVW
EPDFLESLVF PLQVDSEISL AFCDHWITSE DGSLDLLRTN ANSLHYGRDI LPEGYIYNLE
ELVLEKNSIP MAMAAIFRKN AIDFGLLVSD VVGAYDFWLA CLLAAYGRPA YYVSRRLTRY
RVHGQMETVR KAPDKNKNMI YIYEKLIELN LFPKKIDFLH RKCSKSYFQV GKDYLWFNKS
ILARNYFFGA FGSDLNCKAL LYIALSYLPR NFRNVLKITA YGL