| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1339 |
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| Symbol | |
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| ID | 7134646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1154434 |
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| End bp | 1155567 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643529735 |
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| Product | polysaccharide biosynthesis/export domain protein |
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| Protein accession | YP_002425775 |
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| Protein GI | 218668142 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTTAT TCGATAGGAA CAGGATCAAG TCGGCCTTAT GGCAGGCCTT CCAGGGTGGT
GGGTTTTACC GCAAGGCTGT GGCGCTGGGC TTGATGAGTA TAGCGTTATC GGGGTGCGCC
ATCATGACCG AAGGACCGAA GCAGGCCTAT CCCCAGCAGG TACAGCAACC GCAAACGCTC
CCCTCTGCGG TGCTTTCCCA TCATGAAGAC CACCTCTCCC ATGCGACCAT GGAACGCCTC
CTGCACCAGA GCATCACCTA TCATCTGGGG GCGGGGGACG TGGTATCGGT GTCGGTGTAT
CTGCATCCGG ATCTGTCCAT TCCCAGCCCC ATGACCTCTA CAACGGGGTT GGCCGGGGCC
ATCGTCACCA ATGATGGGAA TATCCAGTTG CCGCTTCTGG GGGTGGTGCA TGTGGCCGGT
ATGACCACGA CCCAGTTGCA GACCCGTCTC ACCCGGCTCT ACGCCCAATA CGTCATCGAT
CCCAAGGTCA ATGTGCAACT GCAGGTCGCC CACAGCATCC GCTACTATCT GCTGGGAGAA
TTCATCAAAC CCGGCCTGGT CTATTCCGAC CGGCCATTGA ATGTGCTGGA AGCCATGGCC
TTGGGCGGGT CGGTGAACCT GGCGGATGCC GATCTGCGCG GCGCCTATGT GGTGCAGGAC
GGCCGGAAGC TGCCGGTGAA CTTCCATAAG CTGATCCTGG CGGGCGACCT CCAGCAAAAC
ATTCCCCTCA AAACCGGGGA TACCGTGCTC ATTCCCAGCA TAACCACCAT GCGCGCTTAT
GTCTTCGGCG CCGTCAACAA AGCCGGCCCT GTGCCCTTCG TGAACGGACG CCTGAGCCTG
TTGCAGGCCC TCTCGGATGC GGGCATGAAC ACCACGAACC TCACTACCGC GCGGCTCAGC
GAAATCCGCA TCATTCGGTC GGAAGGCGCC ACCGGACAGT TTTACGTGGT GGACGCCCGG
CGCATTCTGG AAGGCAAGGC GGCCCCCTTC TACCTGAAGT CGGGAGATAT CGTCTACGTG
CCGCAAACGA CCGTCAGCAG CTGGAATCAA GCCATACTGC TCCTGTTGCC GTCCCTGCAG
GCCATCAACC AGTTGCTCAA CCCCTTTGTA TCCATCAAGT TCTTGAGCCA ATAG
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| Protein sequence | MKLFDRNRIK SALWQAFQGG GFYRKAVALG LMSIALSGCA IMTEGPKQAY PQQVQQPQTL
PSAVLSHHED HLSHATMERL LHQSITYHLG AGDVVSVSVY LHPDLSIPSP MTSTTGLAGA
IVTNDGNIQL PLLGVVHVAG MTTTQLQTRL TRLYAQYVID PKVNVQLQVA HSIRYYLLGE
FIKPGLVYSD RPLNVLEAMA LGGSVNLADA DLRGAYVVQD GRKLPVNFHK LILAGDLQQN
IPLKTGDTVL IPSITTMRAY VFGAVNKAGP VPFVNGRLSL LQALSDAGMN TTNLTTARLS
EIRIIRSEGA TGQFYVVDAR RILEGKAAPF YLKSGDIVYV PQTTVSSWNQ AILLLLPSLQ
AINQLLNPFV SIKFLSQ
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