Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1260 |
Symbol | ssb-3 |
ID | 7135763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1103755 |
End bp | 1104240 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643529656 |
Product | single-strand binding protein |
Protein accession | YP_002425696 |
Protein GI | 218666983 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0616311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGTG TAAATAAGGT CACATTGTTG GGGCATCTGG GACGGGACCC GGAGATGCGT TATCAGCCCA GTGGCGGCGC CATCGCGAAC TTCAGCGTCG CGACTTCCGA GACCTTCAAG GACAAGGATG GCAACAAGCA GGAGCGCACG GAATGGCATC GTGTGGTGCT CTTCGGTCGC ATTGCAGAAA TCGCCGGTGA GTATCTGCGC AAGGGCAGCA TGGCTTACGT GGAAGGTCGC ATGCAGACGC GCAAGTGGAC GGACAAGGAA GGGCAGGAGC GCTACACCAC GGAGATCATC GGTGATCGCC TGCAGCTCAT CGGTGGCAAG AAGGAAGAGG GTGGCTCTGA ACACGCTCCC GCTCCGGCAT CGCGCGGTGG AAATACTCCT CCGCCCGTTG AGGATTTTGA CGACGAGGTC CCGTTCAGTT TTAACGGGTT AACGACTTAT GACGTTCCTC ATCTGACCCA TCGCGTCAAG TTCTAA
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Protein sequence | MAGVNKVTLL GHLGRDPEMR YQPSGGAIAN FSVATSETFK DKDGNKQERT EWHRVVLFGR IAEIAGEYLR KGSMAYVEGR MQTRKWTDKE GQERYTTEII GDRLQLIGGK KEEGGSEHAP APASRGGNTP PPVEDFDDEV PFSFNGLTTY DVPHLTHRVK F
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