| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1211 |
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| Symbol | |
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| ID | 7134120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1065275 |
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| End bp | 1067362 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643529608 |
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| Product | TPR domain/sulfotransferase domain protein |
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| Protein accession | YP_002425648 |
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| Protein GI | 218665769 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACC CGCTCCAAGC CCCGACCATG ACCCTCTCCG AGGCCTTGCA ACGGGCCCAG
GCCCACTGGC AGGCCGGACA GGCCGCCCAG GCCGAACAGA TCTGCCAGCG CATTCTGGCG
AGTTTCCCTG GTCAGCCCGA CGCCCTGCAC CTGCAGGGTC TCATGGCGCA TGCCTATGGT
CGTCTGGACC CCGCTATCGA GTATCTCCGC CAGGCCTGTG CCTCGCCTCA GGCAGCAGCG
GTCTACTGGA GCAATCTAGC CGAGATGCTC CGCCAACGCG GACGCCTCGC GGAAGGCGAG
CGGGCCGCCC GCGAGGCGCT CGCCCGCGAT CCCCAACTCT CGGGCGCCTG GAACAATCTG
GGCATCCTCC TGCAGGAGAT GGGACGATTT GACGAGAGCC GGGAATACCT GGAACGGGTA
CGCACCGCTG AGCCAAAAGA TCCCAAGGTA CTCAATAACC TCGGAAATAC CTGTCTGCGG
CAGCGAGACT TCAGCGCTGC CGAGCAGTAC TGGCGGCAGG CTATGTCCCT CGATCCCGCC
TATCCGCAGC CCTACAGCAA TCTCGCCAAG CTCCTCACCG ACCGGGGCGA GATCGAAGCG
GCCATCGATG CGGGACGCCG GGCCATTACG CTCGATCCGC ATCTGACGGA TGCCTATATT
AATCTTGCCG CTGCCGAACA GGAGCGGCAT AACCCCGATG CTGCCCTGCG CTGGGTCGAG
GCGTTGCTTG CCTTTCAGCC TCAGAACGCC CAGGCCTGGT CCACCAAGGC CACCCTCTTG
AAGGAAGCCG AACGCCTGCC TGAAGCCTTG CAAGCCGCTG AGCAGGCGGT GCAACATGCC
CCGGAATCTG CGGATGCGGA ATACGCCCGT GGTAGTGTTC TGCAGGCTCT GGGGCGGCAC
GAAGAGGCTC TGGCCGCCTA TGCCAAGGCT GGCGAACTAC CCGGGGTCAA GGCGGAAGAC
GCACTGATCA GTCAGGCGGT GCTGCACATG GAGCAGGGCG CCAGGACGGA GGCCGAACGC
TTTTTCGAGA AGACCATCGA GCGTTTTCCC CACTCGGCCA GTGCCTGGTA CAACTGGGCC
GATCTGCATC GTTTTGCGCG CGAGGACGCC TTGCTGCCCC GCATGCAGGC CCTGCTGGAG
CAAGAGCTTT TGCCCCGCGA CCGGATGCTG CTGGACTTTG CCCTCGGCAA AGCCCATCTG
GACTTGCAGG ACTCGCAACG TGCCTTTGCC CATCTGCACG CAGGCAATGC CGCCAAGCGT
GCCACTTTCA GCTACGATCC CGCTCAGGCC GATGCACTGG CGGAGCGGAT CATCACCCTG
TTCCCGAAAG ACAAGTGGCA TATTCCGTCC ATATCGCAAG CCGCTGCGGA AGCAATCCCC
GTCTTTGTTG TCGGCATGCC CCGCTCTGGC ACCAGCCTGA TCGAACAGAT CCTCGCCTCT
CATTCCGCAA TACACGGTGC CGGGGAACTG AGTGATCTGC GTCGCATCAT CGATGCGGTC
GGGATATATC CCGAGGCCCT GGTGTCTCTC CCTCCAGAGC AGCTTCGGAG CCTCGGCCAG
CAATATCGGG ATCGAATCAC CCCGCTCGCT GATAAGGCCC GCTATCTCGT CGACAAGATG
CCCGCGAACT TCTTCTATGC GGGGCTCGTT CCGCTGCTCT TGCCCGAGGC GAAGATCATC
CATTGTCGTC GTGATCCGGT GGATACCTGC CTGTCCTGTT ACAGCAAAAA CTTCTCTGGG
GAGCAGCGCT TTTCGTACGA TCTGCAGGAA CTCGGGCGCT TCTACCGGGC CTATGCCAGG
CTGATGGAGC ACTGGCGGCA TATTCTCCCT GCCAGCCAGT TTCTGGAAGT GGACTACGAG
GCGGTGGTGG ACGACCAGGA AGATCAAACC CGCCGTCTGC TCGATTTCCT TGGCCTCGAC
TGGGAGCTCG GCTGCAAGCA CTTTTACGAA ACCCGCCGAG CGGTGAAGAC GGCGAGCGTC
AATCAGGTCC GCAAACCCAT CTATCGGAGC TCCGTCGGTC GCTGGAAGAT CCACGCCGCG
CAGCTCCAGC CGCTGCTGGA GGTGCTGGAG ATCGATCCCG AGGCATGA
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| Protein sequence | MSDPLQAPTM TLSEALQRAQ AHWQAGQAAQ AEQICQRILA SFPGQPDALH LQGLMAHAYG
RLDPAIEYLR QACASPQAAA VYWSNLAEML RQRGRLAEGE RAAREALARD PQLSGAWNNL
GILLQEMGRF DESREYLERV RTAEPKDPKV LNNLGNTCLR QRDFSAAEQY WRQAMSLDPA
YPQPYSNLAK LLTDRGEIEA AIDAGRRAIT LDPHLTDAYI NLAAAEQERH NPDAALRWVE
ALLAFQPQNA QAWSTKATLL KEAERLPEAL QAAEQAVQHA PESADAEYAR GSVLQALGRH
EEALAAYAKA GELPGVKAED ALISQAVLHM EQGARTEAER FFEKTIERFP HSASAWYNWA
DLHRFAREDA LLPRMQALLE QELLPRDRML LDFALGKAHL DLQDSQRAFA HLHAGNAAKR
ATFSYDPAQA DALAERIITL FPKDKWHIPS ISQAAAEAIP VFVVGMPRSG TSLIEQILAS
HSAIHGAGEL SDLRRIIDAV GIYPEALVSL PPEQLRSLGQ QYRDRITPLA DKARYLVDKM
PANFFYAGLV PLLLPEAKII HCRRDPVDTC LSCYSKNFSG EQRFSYDLQE LGRFYRAYAR
LMEHWRHILP ASQFLEVDYE AVVDDQEDQT RRLLDFLGLD WELGCKHFYE TRRAVKTASV
NQVRKPIYRS SVGRWKIHAA QLQPLLEVLE IDPEA
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