Gene AFE_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1145 
Symbol 
ID7134850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1022137 
End bp1023042 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content58% 
IMG OID643529542 
Producttyrosine recombinase, phage integrase family 
Protein accessionYP_002425617 
Protein GI218666422 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00135559 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGACA TTGAAGCGGT AACCGAAGGC TTCATCCGCT GGATATCCGG CCCGAACTTC 
CGGAATCCCT ACTCGAAGGC CACGATTCGC ATTTACGGAC GCAATGTGCA TCGCTTTCTG
GAATTTCTGG ATTTTGATGG TGTAGAGCGC ATCAGCGAAG CCAGCATCCA TCTGGTCCGC
AAATTCGTCA TGACCGGACA GTCTGGCGGC ACCGCTCCAG TCAATACGCA GAACGTACGC
ACAGGCGCGT TAGCGCTTTT CTTCGACTAC CTGGAATCCA CGGAAGAACA TGGGCCGTTT
TCCGGGAATC CCGCCAGAGC CCTCATCGAA GACCAAAAAC ACAAGAAAGG TGGCAACGTC
GGCAAAGCTA CCGCCAGATT GCGTCCGGTG CTCGAATGGG ACGATATGGA CCGCTTGCAG
TATGAAGCAT CGAAACAGGA AACCATTGCC GGAATCCGGG ACGCCGCCCT GATCGGATTC
ATTTTCGATA CAGGCCTGCG CGCCAGCGAG ATATGCGCCC TTCCCCACTC GGCGGCCGAG
TATTATTTCC AGGGCCGATT GCGGGTCATC GGCAAGGGAG ACAAGGAAAG GCTCGTGCGT
TTTACGCCGG AGCACGCGGA TCGCCTACGC GCCTGGATAC GGACCCGGGC GCGGGTCGTA
TCCAAAAGCG ATGCCCTGTT TCTCACGGAC GAGGGGAATG CCCTGAGCAC CCAGGTGCTC
TACATGATTG TCCGGCGGCT TCTCGACCGC GCCGGAATCC AGAAGGCGCA ACAAGGACCC
CATCTCCTGC GGCACACCGC CGCCAGCCGC TGGTTGGCCA AGGGTATGGA TCTGCGCCAG
GTGCAAGAGA ACATGGGGCA CAGCAACATC GGAACGACCA GCAAGTACCT GCACTTGCTG
GGATAG
 
Protein sequence
MIDIEAVTEG FIRWISGPNF RNPYSKATIR IYGRNVHRFL EFLDFDGVER ISEASIHLVR 
KFVMTGQSGG TAPVNTQNVR TGALALFFDY LESTEEHGPF SGNPARALIE DQKHKKGGNV
GKATARLRPV LEWDDMDRLQ YEASKQETIA GIRDAALIGF IFDTGLRASE ICALPHSAAE
YYFQGRLRVI GKGDKERLVR FTPEHADRLR AWIRTRARVV SKSDALFLTD EGNALSTQVL
YMIVRRLLDR AGIQKAQQGP HLLRHTAASR WLAKGMDLRQ VQENMGHSNI GTTSKYLHLL
G