Gene AFE_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1058 
Symbol 
ID7137146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp953382 
End bp954608 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content57% 
IMG OID643529455 
ProductISAfe8, transposase 
Protein accessionYP_002425530 
Protein GI218668169 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.19621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCC AAAAAGCCGT GCGCTACCGA CTCGAAACTA CACCGGAACA GGAAAACCTT 
CTGGCTCGCG CAGTAGGTTG CGTGCGCTTC GTCTGGAACC GGGCACTCTC CGTCCAGAAG
AGCTATCTCG ATCACCAGTG CGGTACCCTG AATTATGCCG GGCTGTGCGA TTTGCTCACA
ACCTGGCGGA ACACGGAAGC TTTCGGATTC CTCGCGGAAT CCCCGTCGAT GCCGCAGCAG
CAGACGCTGA AAAACCTGAC ACGGGCACTC AAAGACGCAT TCGATAATAC ATCCGTCAAG
AAATTCCCGA AATTCAAAAA GAAGTTCGTC CATGACAGTA TGCGCTACCC GGAGCCCGAC
CATATCCGCT TCGATCTGAA GCTAGCGGAC CAAGACGGTC GGCATGTACT TCCTAAAATC
TTCCTGCCGA AAATTGGATG GGTGAAATTC CGCAAGTCCT GCATCATCGG TGGTGAAATC
CGCAATGTCA CCGTCAGCCG TGCGGGTGGG CACTGGTACG TCGCCATTCA GACCGAGAAA
ACAGTCGCCG ATCCGGTTCG CCAGGCTACT ACCGCCGTTG GCGGTGACCG GAACGTAGCG
GACAATGTCC TGACCTTGTC CGATGGTACT ATGTTCCTGC CGGTTACGGC TTATCGGGAT
CTGCAAAAGA GGCTGGCGCG GGAGCAAAGA AAGCTCGCGC ACAAAGTGAA GTTCTCGGCC
AACTGGAAAA AACAGAAGGC CAAAATCGCG CGACTGCATC AGCGAATAGC TGCGACTCGC
AAGACCATTC TGCATCAGAT CAGTACCATC ATCAGCAAAA ACCACGCGGT GGTGGTACTG
GAAGATCTGA AAGTGCAGAA CATGACGGCG TCCGCAAAGG GGACCGTCGA GCAACCCGGG
CGCAATGTCC GGCAGAAATC AGGGCTGAAC AAATCCATTC TCGATCAGGG CTGGGGCATG
CTCAAACAGA TGCTGGGCTA CAAGCTCCAG TGGGCCGGCG GCATACTGCT CTTGGTGGAC
CCTGCCTACA CCTCACAAGC GTGCGCGTCG TGCGGTGCTG TGGACGCCGG GAACCGTAAA
GCGGCAGTGT TCCGTTGTCT GCATTGCGGG CACGAAGCGC ACGCCGATGT GAATGCGGCA
CAGAACATCC TCGCAAGAGG GTTAGCACCC TGCGAGGGGT TGCAGTCAAC GGCGGGGCAC
GCCGGGGTAG CCTGTTTCGC GGCGTAA
 
Protein sequence
MLIQKAVRYR LETTPEQENL LARAVGCVRF VWNRALSVQK SYLDHQCGTL NYAGLCDLLT 
TWRNTEAFGF LAESPSMPQQ QTLKNLTRAL KDAFDNTSVK KFPKFKKKFV HDSMRYPEPD
HIRFDLKLAD QDGRHVLPKI FLPKIGWVKF RKSCIIGGEI RNVTVSRAGG HWYVAIQTEK
TVADPVRQAT TAVGGDRNVA DNVLTLSDGT MFLPVTAYRD LQKRLAREQR KLAHKVKFSA
NWKKQKAKIA RLHQRIAATR KTILHQISTI ISKNHAVVVL EDLKVQNMTA SAKGTVEQPG
RNVRQKSGLN KSILDQGWGM LKQMLGYKLQ WAGGILLLVD PAYTSQACAS CGAVDAGNRK
AAVFRCLHCG HEAHADVNAA QNILARGLAP CEGLQSTAGH AGVACFAA