Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1058 |
Symbol | |
ID | 7137146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 953382 |
End bp | 954608 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643529455 |
Product | ISAfe8, transposase |
Protein accession | YP_002425530 |
Protein GI | 218668169 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.19621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGATCC AAAAAGCCGT GCGCTACCGA CTCGAAACTA CACCGGAACA GGAAAACCTT CTGGCTCGCG CAGTAGGTTG CGTGCGCTTC GTCTGGAACC GGGCACTCTC CGTCCAGAAG AGCTATCTCG ATCACCAGTG CGGTACCCTG AATTATGCCG GGCTGTGCGA TTTGCTCACA ACCTGGCGGA ACACGGAAGC TTTCGGATTC CTCGCGGAAT CCCCGTCGAT GCCGCAGCAG CAGACGCTGA AAAACCTGAC ACGGGCACTC AAAGACGCAT TCGATAATAC ATCCGTCAAG AAATTCCCGA AATTCAAAAA GAAGTTCGTC CATGACAGTA TGCGCTACCC GGAGCCCGAC CATATCCGCT TCGATCTGAA GCTAGCGGAC CAAGACGGTC GGCATGTACT TCCTAAAATC TTCCTGCCGA AAATTGGATG GGTGAAATTC CGCAAGTCCT GCATCATCGG TGGTGAAATC CGCAATGTCA CCGTCAGCCG TGCGGGTGGG CACTGGTACG TCGCCATTCA GACCGAGAAA ACAGTCGCCG ATCCGGTTCG CCAGGCTACT ACCGCCGTTG GCGGTGACCG GAACGTAGCG GACAATGTCC TGACCTTGTC CGATGGTACT ATGTTCCTGC CGGTTACGGC TTATCGGGAT CTGCAAAAGA GGCTGGCGCG GGAGCAAAGA AAGCTCGCGC ACAAAGTGAA GTTCTCGGCC AACTGGAAAA AACAGAAGGC CAAAATCGCG CGACTGCATC AGCGAATAGC TGCGACTCGC AAGACCATTC TGCATCAGAT CAGTACCATC ATCAGCAAAA ACCACGCGGT GGTGGTACTG GAAGATCTGA AAGTGCAGAA CATGACGGCG TCCGCAAAGG GGACCGTCGA GCAACCCGGG CGCAATGTCC GGCAGAAATC AGGGCTGAAC AAATCCATTC TCGATCAGGG CTGGGGCATG CTCAAACAGA TGCTGGGCTA CAAGCTCCAG TGGGCCGGCG GCATACTGCT CTTGGTGGAC CCTGCCTACA CCTCACAAGC GTGCGCGTCG TGCGGTGCTG TGGACGCCGG GAACCGTAAA GCGGCAGTGT TCCGTTGTCT GCATTGCGGG CACGAAGCGC ACGCCGATGT GAATGCGGCA CAGAACATCC TCGCAAGAGG GTTAGCACCC TGCGAGGGGT TGCAGTCAAC GGCGGGGCAC GCCGGGGTAG CCTGTTTCGC GGCGTAA
|
Protein sequence | MLIQKAVRYR LETTPEQENL LARAVGCVRF VWNRALSVQK SYLDHQCGTL NYAGLCDLLT TWRNTEAFGF LAESPSMPQQ QTLKNLTRAL KDAFDNTSVK KFPKFKKKFV HDSMRYPEPD HIRFDLKLAD QDGRHVLPKI FLPKIGWVKF RKSCIIGGEI RNVTVSRAGG HWYVAIQTEK TVADPVRQAT TAVGGDRNVA DNVLTLSDGT MFLPVTAYRD LQKRLAREQR KLAHKVKFSA NWKKQKAKIA RLHQRIAATR KTILHQISTI ISKNHAVVVL EDLKVQNMTA SAKGTVEQPG RNVRQKSGLN KSILDQGWGM LKQMLGYKLQ WAGGILLLVD PAYTSQACAS CGAVDAGNRK AAVFRCLHCG HEAHADVNAA QNILARGLAP CEGLQSTAGH AGVACFAA
|
| |