Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0973 |
Symbol | |
ID | 7135580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 892877 |
End bp | 893881 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643529371 |
Product | putative periplasmic protease |
Protein accession | YP_002425447 |
Protein GI | 218666621 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACCT TCTTCAGTCA TTACCTGCTC TTCCTTGCCG ACACCGCCAC CATCGTGGTC GCCCTGCTCG TCGTCGTGGG CGGCATCGCC GCCATCGCCC TGAACAAACG CAAAAGCCCC GCGTCCGGAC AGGTGCAGGT CACCGACCTG CGCAAGCAAT TAGAACAATC GGGCGAAAAC GTCCAGCAAT ACCGGCTGGA CAAAAAAGCC CTGAAAATCC ATCGGAAGAC CCTCAAGAAA GACCGCAAAG ACAGGGCCAA CGACCCTCTT GCCGAAAGCT GCACCTATCT GCTCGACTTC AAGGGCGATA TCCGCGCCTC TGCCGTCAGT GCCCTGCGCG AAGAAATCTC CGCCATCATC CAGGCCGCAA AACCCGGCGA CACCGTCCTG CTGCGCCTGG AAAGCGGCGG CGGCATGGTC AACACCTATG GTCTCGCCTC GGCCCAGTTA TTACGTCTGC GTGCCGCCAA GATTCATCTC ACGGTGCTGG TCGACGCCGT CGCCGCCAGT GGCGGCTACA TGATGGCGGT CACGGCTGAC CGTATCGTCG CCAGCCCCTT CGCCCTCATC GGCTCCATCG GCGTCGTCGC CCAGATTCCC AACTTCCACC GCTGGCTGCA GGATCGCAAC ATCGACTGGG AACAGTTCAC CGCCGGCAAA TTCAAGCGCA CCGTCACCTT GTTCGGCGAG AACACCGAAA CCGGCCGCGC CAAGCTGCGC GAAGAACTGG AAGAAACCCA CGCCCAATTC CGCGACTTCG TCCAGCAATA CCGTCCGCAA CTGGATTTGG AACAAGTCGC CACTGGCGAA GCCTGGCTGG GCAACAAGGC CCGCCAACTC GGATTGGTGG ATGATCTCGC CACCAGCGAC GAGATCATCC TGGAAGCGGT GCGACAGGGC AAAGTGCTCG CCCTCCATTA TCAGCGCCAA AAGACACTCC CCCAACGCCT CGGTCTCGCT GCCCAGCAAA GCTGGGACAA ACTCTGGCAG CCGCCCATCT CCTGA
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Protein sequence | METFFSHYLL FLADTATIVV ALLVVVGGIA AIALNKRKSP ASGQVQVTDL RKQLEQSGEN VQQYRLDKKA LKIHRKTLKK DRKDRANDPL AESCTYLLDF KGDIRASAVS ALREEISAII QAAKPGDTVL LRLESGGGMV NTYGLASAQL LRLRAAKIHL TVLVDAVAAS GGYMMAVTAD RIVASPFALI GSIGVVAQIP NFHRWLQDRN IDWEQFTAGK FKRTVTLFGE NTETGRAKLR EELEETHAQF RDFVQQYRPQ LDLEQVATGE AWLGNKARQL GLVDDLATSD EIILEAVRQG KVLALHYQRQ KTLPQRLGLA AQQSWDKLWQ PPIS
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