Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0963 |
Symbol | |
ID | 7135816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 881688 |
End bp | 882704 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643529361 |
Product | male sterility protein |
Protein accession | YP_002425437 |
Protein GI | 218666203 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTTC ACAAAATTTG TATTCTGGGG GGCACGGGCT TCGTGGGGCG GCACCTGGCA GAGCGGTTGA GCCAGAAAGG ACACGCCGTG CGCATCCTGA CGCGCAACCG CGAACGTCAC CGTGAAAATC TGCTGGTACT CCCCGGTGTG GAGTTGATCG AGGCCAATGT CCATGACCCC GTCGCGTTAA AAAAACAGCT TGCAGGACGA GATGTCGTCA TCAATCTCGT GGGAATCCTC AATGAACGCC ATCAAGGCGA TTTCGACAGG AACCACGTCG AACTCCCGCG CCTGGTAGTC GGCGCCTGCA ATGATCTGGG CATCCCCCGT CTACTTCACA TGAGCGCATT GGGAGCCAGC CCCACCGGTC CCAGCGCCTA CCTGCGCTCC AAGGGGACGG GTGAGGAGAT CGTCCGTCAG TCGAACGGGA ATAGGGCGGA AATGGGACGC TTTGATGATC TGGAAGAACC CATGCCACTC TGGAGCCATG GGCTCAAAAC CACTTCTTTT CGCCCAGCGG TGATTTTTGG TGAGGGTGAC AGCTTTTTCA ACCGCTTCGC CGGGCTATTG CGCCGCATTC CCTTTTTCAT TCCGCTGGCC CGGTCGAAAG CCAGAATGCA GCCGGTCTGG ATTGAAGATG TGGTCAGCGC CTACGTGCAA TCCATGGATG ACGAAAAAAC CTACGGTCAA GCCTATGATC TGTGTGGTCC GAAAGTCTAT ACCCTCGGTG AACTGGTGGC CTATACCCAG AGTCTGATCG GCACCCGTCG CGTCATCGTG CCCCTCGGTG ACTTCGCCGG CAATCTTCAG GCCAGCATCA TGGAAAGGCT GCCGGGCAAG GTACTCACCC GCGATAACCT GCTCTCCCTG TCTATCGACA GCGTCTGTAC CAGAAATGAT CTGGCCGAGA GTTTTCAGAT AGAGGCCACC TCTGTCGAGA GTATCGTACC CGGCTACCTG GGCGGGAAAG GTGCCCGCGC GGAGCGTCTG GCGGAAATCC GCAACCGGCG TTCCTGA
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Protein sequence | MTLHKICILG GTGFVGRHLA ERLSQKGHAV RILTRNRERH RENLLVLPGV ELIEANVHDP VALKKQLAGR DVVINLVGIL NERHQGDFDR NHVELPRLVV GACNDLGIPR LLHMSALGAS PTGPSAYLRS KGTGEEIVRQ SNGNRAEMGR FDDLEEPMPL WSHGLKTTSF RPAVIFGEGD SFFNRFAGLL RRIPFFIPLA RSKARMQPVW IEDVVSAYVQ SMDDEKTYGQ AYDLCGPKVY TLGELVAYTQ SLIGTRRVIV PLGDFAGNLQ ASIMERLPGK VLTRDNLLSL SIDSVCTRND LAESFQIEAT SVESIVPGYL GGKGARAERL AEIRNRRS
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