| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0955 |
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| Symbol | cydA |
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| ID | 7134386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 871042 |
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| End bp | 872670 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643529353 |
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| Product | cytochrome d ubiquinol oxidase, subunit I |
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| Protein accession | YP_002425429 |
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| Protein GI | 218665033 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.740472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATCA ATCCCACGGT GGTGGAGCTA TCGCGCCTAC AGTTCGCGCT GACCGCTCTC
TACCACTTCT TATTTGTACC ACTCACCCTG GGTATGACCT TTATTCTGGC CACCATGGAA
ACGGTGTATG TCATCACCGG CAAACAGATA TATAAAGAAA TGACTCAGTT CTGGGGCAAG
CTCTTCGGCA TCAACTTTGC CCTGGGTGTC GCTACCGGCC TGACCATGGA GTTTGAATTC
GGGACCAACT GGTCCATGTA CTCCCACTTC GTGGGCGATA TTTTCGGTAC CCCGCTGGCC
ATTGAGGGGC TGATGGCCTT CTTCATGGAA TCCACCTTTG TCGGTGTGAT GTTCTTCGGC
TGGGACCGCA TGAGCCGCAA GGCGCACCTC GTGGTCACCT ATCTGGTTGC TCTCGGTTCC
AACCTTTCTG CATTGTGGAT TCTCATTGCC AACGGCTTCA TGCAGGACCC GCGGGGCGGC
ACTTTTGATC CCAATACCAT GCGGATGCAA TTTTCCAGCT TTATCGACCT GATCTTCAAT
CCGGATGCGC AGGCCAAGTT TGTGCATACC TCCATCGCGG GTTTCGTAAC CGGCTCCATG
TTTGTCATGG GCGTCAGCGC TTATTACATG CTGACCAACA AGCGGAAAGA TATGGCGTTG
CGTTCCTTCC GGATCGCCAC GCTCTTCGGC GTGATTTCCA GCATCGGCGT CATTACCCTG
GGTGACGCCC TGGGCTACAT TGATGGTCAG AAACAACCCA CCAAGCTGGC GGCCATGGAA
GCCATCTGGA ACACGGATTA CAACACGGTG TCCGCGTCCT GGAACCTCAT CGCCATCCCC
AGCCGTAGCG AACAGAAGAA TCTCTTCGAG GTTTCCATCC CGTATATCCT TACACCGCTG
CTGACCCACT CCGAAACGAC GGTCATTCCC GGCATCATCC AGCTGGAGCA GGAAGCCAAG
CCAAAGATTG CCAATGGCAT CAAGGCGATG ATCGCGCTGA AGGAGTACAA CCTGGATCAT
AGCAATACCC AGGCACTGGC CACCTTCAAG CAGTATGAAA ATGACATGGG TTACGGTTTC
CTGGCCATGC AGTTTGCGCC TGATCAGGAC CTCAAGAAGA TCGACGCCAC CAATCTGCCC
AGCATTCTGG ACAAGACCGC GAAGGACACC ATCCCCAATG TCTGGGTAGA GTTCTGGGCC
TTCCGCCTGA TGGTCGCCAT GGGCTTCTTC ATGCTGGTCC TCTTCGCTTT CGCGGCTTAT
TTCAGCCTGA AGAACGAAAT CGAGAAACAC CCCACCCTGC TGAAACTGGC GATGTGGAGT
ATTCCCTTGC CTTGGGTAGC CTGTGAGTTC GGTTGGATCA CCGCCGAAAA TGGTCGTCAG
CCGTGGACGG TATTCGGCTG GCTGCCCACC TTCGTCTCCG CCTCCACCCA CAGCGTCGGC
TACATGGTGT TCTCGCTTAT CGGGTTCACC CTGCTGTACA GCTCTTTCAT CGCGGCGGAG
CTCTACCTGA TGTTCAAATA TGCCCGTCTG GGTCCGCAGG ATGACCATCA TGGTCACGGT
TCTGCACCTG CGGGTGGCGG CATGGCGGGT CAGCCGGTGT TTGCCAAACC CAGCATGGAT
CGCAAGTAA
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| Protein sequence | MLINPTVVEL SRLQFALTAL YHFLFVPLTL GMTFILATME TVYVITGKQI YKEMTQFWGK
LFGINFALGV ATGLTMEFEF GTNWSMYSHF VGDIFGTPLA IEGLMAFFME STFVGVMFFG
WDRMSRKAHL VVTYLVALGS NLSALWILIA NGFMQDPRGG TFDPNTMRMQ FSSFIDLIFN
PDAQAKFVHT SIAGFVTGSM FVMGVSAYYM LTNKRKDMAL RSFRIATLFG VISSIGVITL
GDALGYIDGQ KQPTKLAAME AIWNTDYNTV SASWNLIAIP SRSEQKNLFE VSIPYILTPL
LTHSETTVIP GIIQLEQEAK PKIANGIKAM IALKEYNLDH SNTQALATFK QYENDMGYGF
LAMQFAPDQD LKKIDATNLP SILDKTAKDT IPNVWVEFWA FRLMVAMGFF MLVLFAFAAY
FSLKNEIEKH PTLLKLAMWS IPLPWVACEF GWITAENGRQ PWTVFGWLPT FVSASTHSVG
YMVFSLIGFT LLYSSFIAAE LYLMFKYARL GPQDDHHGHG SAPAGGGMAG QPVFAKPSMD
RK
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