Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0922 |
Symbol | |
ID | 7135063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 835910 |
End bp | 837373 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643529321 |
Product | drug resistance transporter, EmrB/QacA family |
Protein accession | YP_002425397 |
Protein GI | 218667025 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACATCCT CATCAACGCC CGTTTCCGCA TCTACTTTTC GTCTGGACTG GCCGGCAAAA GTCATTTTCT TCGCCATCCT GTCGTCCATT TTTTTGGCGG CGATGGACCA GACCGTGGTC TCCACCGCCC TGCCGACCAT CGCCCGCGAT CTCCATGGCC TGGCCAAACT ACCCTGGATC GTGACCGCTT ATCTGCTGAC CTCCACCGTC TGTTTGCCGG TATACGGTAA ACTGGGGGAT CTTCTGGGGC GCAAGTATCT CCTGCAATCG GCAGTGTTGC TGTTTTTGGC AGGATCGGTT TTGTCCGGCC AGGCGCAAAC CATTGACGAG CTGATGGTGT TCCGGGCCTT GCAGGGGATT GGCGGTGGCG GTTTGCTGGT GACCGCCATC GCCTCCATCT CGGACTTCAT TCCCATCACC CAGCGCAGCC GTTATCAGGG GCTGGTGGGC GCCGCTTTTG GTCTCGCGAC CTTGGTCGGG CCCTTTCTCG GTGGCTTTAT CGTGGAGACC ATGGGCTGGC GTTGGATATT CTATATCAAT GTGCCCATCG GTATATTTTC CTTTTTCGTC ATCGGCTTCG CCTTTCCCAG ACCGAAAACG GCCGAAAAGG TGCGGATGGA TGTACCGGGA ACGGTCCTGC TGACCACCAG CCTGAGCGCC CTGGTGTTAT TTGCCAGCGT GTCCGGGACG GTGTTGCCCT GGGATTCCGC CGGACCATGG CTTCTTCTCG CCGCGGGGCT GAGCGCGTTC GGCGGATTTA TACGGATCGA GCGGCATCAT CCGGAACCTC TGTTGCCGCT CGCTTTTTTT CGTTTCAGAA CTTTTTCGCT GAGTGTAATC ATCTCTTTTT TTGTCGGGGT GGCGATGCTC GGTTCCGTCA GCTTTCTGCC CATTTATTTG CAGGATGTGC GTGGTTTCTC GCCGACTGCC TCCGGTCTGG AACTGCTATT TTTGCTCCTG GGCATGTTGG CAATGTCGGT GCTGACCGGG CGCCGGATCA GCCGGACTCA GCGTTATCGG GAGTTTCCCA TCGCCGGCGC CCTGCTCATC ACCCTAGCGC TTGGGCTGCT TTCCATGCTC GGGCAGCATA CGCCCATGTG GCGCATCGAC GCGGTACTGG TGCTGCTGGG ACTGGGGCTG GGCACGACCA TGCAGGTCTT GGTGCTCTCT GCCCAGCTTG CGGTGCCGCA CCGCCACCTG GGGGTGGCGA CGTCAACCGT CACCCTGTTC CGTTCCATGG GCGGCACTCT GGGGGTTGCG GCTTTCGGCG CGGTGTTTTC TGCCTTTTTG GCGGGGGGAT CTCACGGTTA TGCCCAGGAG GGGGCGCCTG CCCTGATCGT CCAGACGCTG CATGCGGACT TTTTGATCGC AGCGCTGTTC AGCTTTGCCG CATCGGTCTG TGCGTGGTTT TTGGAGGATA TGCACGTGCT CGTCAAGCGC CGGGATGCCC TCGATCGAGG GTGA
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Protein sequence | MTSSSTPVSA STFRLDWPAK VIFFAILSSI FLAAMDQTVV STALPTIARD LHGLAKLPWI VTAYLLTSTV CLPVYGKLGD LLGRKYLLQS AVLLFLAGSV LSGQAQTIDE LMVFRALQGI GGGGLLVTAI ASISDFIPIT QRSRYQGLVG AAFGLATLVG PFLGGFIVET MGWRWIFYIN VPIGIFSFFV IGFAFPRPKT AEKVRMDVPG TVLLTTSLSA LVLFASVSGT VLPWDSAGPW LLLAAGLSAF GGFIRIERHH PEPLLPLAFF RFRTFSLSVI ISFFVGVAML GSVSFLPIYL QDVRGFSPTA SGLELLFLLL GMLAMSVLTG RRISRTQRYR EFPIAGALLI TLALGLLSML GQHTPMWRID AVLVLLGLGL GTTMQVLVLS AQLAVPHRHL GVATSTVTLF RSMGGTLGVA AFGAVFSAFL AGGSHGYAQE GAPALIVQTL HADFLIAALF SFAASVCAWF LEDMHVLVKR RDALDRG
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