| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0914 |
|---|
| Symbol | hup |
|---|
| ID | 7135224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 830639 |
|---|
| End bp | 830911 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643529314 |
|---|
| Product | DNA-binding protein HU |
|---|
| Protein accession | YP_002425392 |
|---|
| Protein GI | 218666540 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.196839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT CGGAGTTGAT CGAGAAGATT GCAGAAGAAG CTGGCGTGAC CCGTGCCGCC
GCCGGCCATA CTCTGGATGC GCTTGTCAAG GTGGTTACTG ACGCGCTCAA GGCTGGTGAT
CAGGTAACTC TGGTCGGTTT CGGTTCATTT CTTGTTTCCA GCCGTGAGGC GCGCAAAGGC
CGTAATCCCG CTACCGGCGC GGAAATCATG ATCGCCGCAA GTCGCACGCC TAAATTTAAG
GCTGGTAAAG CGTTGCGTGA TGCAGTAAAC TAG
|
|---|
| Protein sequence | MNKSELIEKI AEEAGVTRAA AGHTLDALVK VVTDALKAGD QVTLVGFGSF LVSSREARKG
RNPATGAEIM IAASRTPKFK AGKALRDAVN
|
|---|
| |