Gene AFE_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0903 
SymbolrpsA 
ID7135365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp819822 
End bp821528 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content58% 
IMG OID643529303 
Productribosomal protein S1 
Protein accessionYP_002425381 
Protein GI218667071 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.055479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCC CTAACGCTGA AATGCTTGTT GAACCCAGTT TTGCCGAGAT GTTTGAAGAA 
AGCCAGAGCA CCCAGGGCCT CAAGCCCGGC GAGTTGCTCA CCGGCATCGT GACCCGCGTC
GATAACGACT TTGTCATCGT TGACGTGGGC CTCAAGTCTG AAGGGCCGAT TCCTGCCGAG
CAGTTCCGCA ATGCGGAAGG CGAAATAGAG GTGAAGGTCG GGGACTCCGT AGAGGTCTGT
CTGGAGTTGG TGGAAGACGG TATGGGCGAA ACCCGTCTCT CCCGTGAAAA AGCCCGCCGA
GCCAAGACCT GGGTCGACCT GGAGAAGTCC TTCAACGACA ACGCCGTGGT ACATGGCTTC
CTCACCGGCA AGGTGAAAGG TGGTTTCACC GTCAGTATCG ACGGTGTGCG TGCCTTCCTG
CCCGGCTCTC TGGTCGACGT GCGCCCGGTA CGGGATGTGG CGTATCTCGA AGGCAAAGAC
CTCGAGATGA AGATCATCAA GCTGGACCGC AAGCGCAACA ACGTGGTGGT CTCCCGCCGT
GCGGTGGTCG AGCAGGAACA GAGCGTGGAA CGCGGCGCAC TGCTCGAAAG CATTCAGGAA
GGCGCGGTCC TCGAGGGCGT GGTCAAGAAC CTCACCGATT ACGGCGCGTT TATCGACCTG
GGTGGTATCG ACGGCCTGCT GCATATCACC GATATGGGCT GGCGCCGGGT CAAGCATCCC
AGCGAAGTGG TCACCGTGGG CGGTGAAGTG CGTGTTCTGG TCCTGAAGTT CGACCGCGAG
CGCGGCCGTA TCTCTCTCGG TATGAAGCAG CTGGGTGAAG ACCCCTGGCG CGATATCGCC
CGCCGTTATC CGGAGGCCAC CCGAATTTTC GGTAAGGTCA CCAACGTTAC GGATTACGGC
GCGTTCGTCG AGATCGAGGA AGGTGTCGAA GGTTTGGTGC ATGTCTCCGA AATCGACTGG
ACCAACAAGA ACATCAATCC GGCCAAGGCC CTGCATGTCG GCCAGGAAGT CGAAGTGATG
ATCCTGGATA TCGACGAAGA GCGCCGCCGC ATTTCGCTGG GTATCAAACA GTGCCTGCCC
AATCCGTGGG ACGACTTCGC ACAGAACTTC CAGAAGGGCG ATCGTGTCTC CGGTCAGATC
AAGAGTATTA CCGACTTCGG CGTGTTCGTC GGTCTGGATG GTGGTATCGA CGGCCTGATC
CATCTTTCCG ATCTCGCCTG GGACCGTACC GGCGAAGAAG CGGTACGGGA CTTCAAGAAA
GGCGATACTC TGGATGCGGT GGTTCTCAGC ATTGATCCGG AGCGGGAGCG TATCAGTCTG
GGCGTCAAGC AGATGGAAAC CGATCCGTTC ATCCAGTTTG TGGTGGCCAA TGAAAAGGGC
GCCTTGGTGG AAGGTGAGGT GATTTCGGTG GACAGCCGTG GTGCTGAGAT TCGGCTTGGC
GAGGGCGTGG AAGGATTCCT GCCCCATCGT GAACTGGCGC GTGGTGTGAC CTTGTCAGCC
GGGGATAAGA TCGAAGTCAG CATTGCGATG GTGGACCGCA AGAACCGTAC CCTGACGCTC
AGCACCAAGG CTCGGGAAGC CGCCGTTTCC CAGGAAGATC AAACAGCGGC GGTACAGCAA
TATGCGCGTA GTGCGGCGAC GGGCACCACC AGTCTGGGCG ATCTGATCAA AGAACAGCTC
AAGCGTAAGC AGGAAGAAGA AAGTTAA
 
Protein sequence
MTTPNAEMLV EPSFAEMFEE SQSTQGLKPG ELLTGIVTRV DNDFVIVDVG LKSEGPIPAE 
QFRNAEGEIE VKVGDSVEVC LELVEDGMGE TRLSREKARR AKTWVDLEKS FNDNAVVHGF
LTGKVKGGFT VSIDGVRAFL PGSLVDVRPV RDVAYLEGKD LEMKIIKLDR KRNNVVVSRR
AVVEQEQSVE RGALLESIQE GAVLEGVVKN LTDYGAFIDL GGIDGLLHIT DMGWRRVKHP
SEVVTVGGEV RVLVLKFDRE RGRISLGMKQ LGEDPWRDIA RRYPEATRIF GKVTNVTDYG
AFVEIEEGVE GLVHVSEIDW TNKNINPAKA LHVGQEVEVM ILDIDEERRR ISLGIKQCLP
NPWDDFAQNF QKGDRVSGQI KSITDFGVFV GLDGGIDGLI HLSDLAWDRT GEEAVRDFKK
GDTLDAVVLS IDPERERISL GVKQMETDPF IQFVVANEKG ALVEGEVISV DSRGAEIRLG
EGVEGFLPHR ELARGVTLSA GDKIEVSIAM VDRKNRTLTL STKAREAAVS QEDQTAAVQQ
YARSAATGTT SLGDLIKEQL KRKQEEES