Gene AFE_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0857 
Symbol 
ID7136000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp781692 
End bp782381 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content61% 
IMG OID643529263 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002425342 
Protein GI218665508 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATA GCAAGGAGGC GCTGCTGCTT CGCCTGCACC ACACCCCGCT TTTTTCCGCA 
TGGCCCAACG ATATGATCGC GCCGCTGCTC GCCCAATCCC AGCCCCTGAC TCTGGAGTCG
GGAGAGATTC TCTTTGCCGA GGGATCGCCA GCCCGATCCT TCTATTTCCT GGCGGTAGGA
CGAATTAATC TGATTGCGGC AGCGGCCACG GGGCAGGAGA AAATTGTCGA AATCATCCAG
CCCGATGATC TTTTCGCCGA GGCGGTGGCC TTTCTCGGGG GGCGCTATCC GGTGACGGCG
CAGGCCGATG CCACGACCAC GGTACTGGAG ATCCCGCTGG ACCTTTTTGT CGCGACTCTG
GAGCAGCGGC CATTGTTGAT GCGCCAGATG CTGGCGCGCC TCAGTATGCG CCTGCATTTT
CTGGTCAAGG AGCTGCGCCA TCTGAGTGTG GAGTCGGCGG AGCAGCGCTT GGCCAGCTAT
CTGCTGGAGT TGTGTCCGGT AGTCAATAGC CCCGCTGCCA TTGAGCTCCC CGCCAAGAAA
GCGGCGGTCG CGGCGCGTTT GGGCTTGACG CCGGAAACGC TGTCGCGGGT GTTGTCCAGA
ATGCGTAAGG CAGGACTCAT AGAAGTGGAA CAACGGACGA TCAGCATTCC CGACCCTCTT
GCCTTACGGC GCTGGGCCGG CGGGCGCTGA
 
Protein sequence
MGNSKEALLL RLHHTPLFSA WPNDMIAPLL AQSQPLTLES GEILFAEGSP ARSFYFLAVG 
RINLIAAAAT GQEKIVEIIQ PDDLFAEAVA FLGGRYPVTA QADATTTVLE IPLDLFVATL
EQRPLLMRQM LARLSMRLHF LVKELRHLSV ESAEQRLASY LLELCPVVNS PAAIELPAKK
AAVAARLGLT PETLSRVLSR MRKAGLIEVE QRTISIPDPL ALRRWAGGR