Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0813 |
Symbol | |
ID | 7135169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 739817 |
End bp | 741214 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643529219 |
Product | major facilitator family transporter |
Protein accession | YP_002425301 |
Protein GI | 218666668 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACCT CACAAAACGC ACTGGACGGG CGTGAACGCC GATCCATTAT TGCCTTGGCC GGAATATTTG GTTTACGCCT GCTCGGCTTG TTTCTGGTAT TACCGGTGTT TTCCGTCTAT GCCCACGGAT TGCATGGGGC AACGCGCCAT CCAGTACTCA TTGGCATTGC TCTGGGTGCT TACGGCCTGA CTCAAGCCAT TTTCCAAATC CCCTTCGGCA GACTGTCAGA TAAGTGGGGT AGAAAGCCTG TCATTGCGGC GGGACTCCTC ATTTTTGCCG TTGGCAGCGT TATCGCCGCA CAGGCCACCA GTATCGAATG GCTGCTGGCA GGGCGAATCA TACAAGGTGC AGGTGCCATA GCCGCAGCCA TCATAGCGCT CACCGCGGAT CTGGTGCGCG AAGAACGCTG GACCAAGGCT ATGGCCACTA TCGGCATCAC CATTGGCATC AGCTTTAGCG TGTCGCTGGT GTTATCCGCG CCGTTAGCAC AATGGATTGG GGTGCAAGGG ATATTTTGGT TGACGGCGGC GCTGTCCATC CTCGCCATCG GCGTGCTCTA CAAGGTGATT CCGGATGTTC CGGCACGTTT CCATCGTGAT GCCGAAATAA ACCCTGCCGC ACTGAGGGAC GTACTAAGGA ATCCCAACCT GCTCCGTTTG GACTTTGGTA TATTTTCACT CCATACAGGG CTGACGGCGC TCTTCGTGGT GCTTCCGCTG GTGCTCATTG ATCCGCAGCA TCCTCTCCTC TCTGAGGCGG ATCAGTGGAT GTTGTACCTC CCGGTCATGC TGCTTTCCTT TATAGCGATG ATCCCCTTTA TCATTGTCGG TGAGGCCAAG CATCGCCTCC GGGAAGTCTT TGTGCTGGCG ATCGCGATCC TGTTGGCTGC TGTCGCCTGG ATGGCACTTT CCAATCACAG CATCTGGTCC ATTGCCATCG CGCTGTTTCT GTTTTTTGTG GGTTTCAACG TGCTGGAGGC AAGTTTACCT TCACTAGTGG CCAAATTCTG TCATCCAGGT GCCAAGGGAA CGGCCACTGG CGTATATACC ACGGCGGAGT TTCTAGGAGC ATTCACTGGC GGTTTGTTGG GAGGGTTACT TTATTTGCCC GGTCAACACA ACTACAGTGA TGTCTTCTGG GCCGTAGCGG CCATCTATTT GATCTGGTTA ATAGTGGCGC TCACGATGCA GCAGCCACGT TATGTCGCCA CCAGGATATT TCCTCTTCCT GCCGATAGTC AAGACAACAA TCAACTCACC CGGCAACTTC TGCAATTGCC TGGAGTGGTG GAAGTGGCAA TTTTTCCGGA TGAGAATGCG GTGTATTGCA AGGTAGAGAG CAAAATATAC GATGACGATC GGGTGCGATC CATTATTGGA TATGCAAACC AAACATAG
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Protein sequence | MTTSQNALDG RERRSIIALA GIFGLRLLGL FLVLPVFSVY AHGLHGATRH PVLIGIALGA YGLTQAIFQI PFGRLSDKWG RKPVIAAGLL IFAVGSVIAA QATSIEWLLA GRIIQGAGAI AAAIIALTAD LVREERWTKA MATIGITIGI SFSVSLVLSA PLAQWIGVQG IFWLTAALSI LAIGVLYKVI PDVPARFHRD AEINPAALRD VLRNPNLLRL DFGIFSLHTG LTALFVVLPL VLIDPQHPLL SEADQWMLYL PVMLLSFIAM IPFIIVGEAK HRLREVFVLA IAILLAAVAW MALSNHSIWS IAIALFLFFV GFNVLEASLP SLVAKFCHPG AKGTATGVYT TAEFLGAFTG GLLGGLLYLP GQHNYSDVFW AVAAIYLIWL IVALTMQQPR YVATRIFPLP ADSQDNNQLT RQLLQLPGVV EVAIFPDENA VYCKVESKIY DDDRVRSIIG YANQT
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