| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0764 |
|---|
| Symbol | |
|---|
| ID | 7137119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 693860 |
|---|
| End bp | 694654 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643529170 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002425252 |
|---|
| Protein GI | 218665563 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCG TCTGGCTTTA TTTGTTTTCC GGAGCAGTCG CGGGCATAAT TTCAGGAATG
CTAGGAGTTG GCGGCGGGAT CGTCCTGGTC CCTATCCTGA TTTTTATCTT TGGTGTTCTC
GCCATACCCG TAGGCATGGC AGCACATATG GCAATCGGGA CGTCCCTGTC AACAATTATA
TTTACCTCCA TGTCGGCAAT ACATGCTCAG CACAGACGAA AAGCAATTGA CTGGAATCTG
GTCAGAAAGC TTGCTCCGGC GACCATTCTC GGGAGCCTCA TCAGCGGTTA TCTGGCAGGG
CTGATTCCCG GACAGGCATT GAAAGCAATA TTCGGCGTAT TTTTAGCGGC GGCGGCGGTG
CAAATGTTTT TTGAATGGCG GCCGGCGCCC TATCGTACCC TGCCTGGCCC CTTGGCCCTT
TTGGGCATTG GTACGGGTAT TGGTGCGCTC TCCGCGATGT TGGGGATTGG CGGTGGCACG
CTCACGGTTC CATTCTTCAA TTGGTGTAAC GTGGACTTGC GTCGGGCCAT AGCCACGTCA
ACGACTTTGG GGTTTGGGCT GGCGATCTTT GGCACCATTG GTTTCATTGT ATCCGGATTT
CAGCGGCCCG GATTGCCGTC GGCCAGTTTT GGCTATGTTT CCTTGCCGGC TATGCTGGGA
ATAGCGAGTA CCGCAGTGCT ATTCGCGCCG TTTGGCGTTC ATTTATCATA TCGTCTTCCC
GTGCGCCGAC TCAAACGCAT ATTCGCTTTG CTCCTCCTCT GCCTTGCGTT TAATATACTC
CTGAATTTCA TATAG
|
|---|
| Protein sequence | MNIVWLYLFS GAVAGIISGM LGVGGGIVLV PILIFIFGVL AIPVGMAAHM AIGTSLSTII
FTSMSAIHAQ HRRKAIDWNL VRKLAPATIL GSLISGYLAG LIPGQALKAI FGVFLAAAAV
QMFFEWRPAP YRTLPGPLAL LGIGTGIGAL SAMLGIGGGT LTVPFFNWCN VDLRRAIATS
TTLGFGLAIF GTIGFIVSGF QRPGLPSASF GYVSLPAMLG IASTAVLFAP FGVHLSYRLP
VRRLKRIFAL LLLCLAFNIL LNFI
|
|---|
| |