| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0718 |
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| Symbol | hypB-1 |
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| ID | 7134795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 643935 |
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| End bp | 644708 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643529124 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_002425206 |
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| Protein GI | 218666244 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCATGACC ATGCTGCGCA TTCGCATGCC CACGGCGGTG CGGGCTTCCA TCTCCACCCC
CATCCCCATG TACCGGCGGA CGGGGATGCC CACCTGGTAT CTCTGGAGGC GCGGATTCTG
GACAAAAATG ACCGCCTTGC GGAACGCAAT CGCGGCTGGC TGGCAGGACG GGGCGTGTTT
TCCCTGAATC TCATGAGTTC ACCCGGCGCC GGGAAGACGA CCCTGCTGGA AAAAACCCTG
GCAGAACTGG CGGGCGAGTT CCCCCTGGCG GTAGTGGAGG GCGATCAGGA AACCACCCAC
GATGCGGAAC GCATACGCCA GGCGGGTTGC AACGTGGTGC AGATCAATAC CGGTCAGGGC
TGTCATCTGG AGGCGGATAT GGTGGCGCAG GGACTGCAGG AGATCGACCC GGCCGCCGGT
TCCGTCGTCT TCATCGAGAA CGTGGGAAAC CTGGTGTGCC CGGCCCTCTT TGATCTCGGT
GAAGCGGCAC GGGTGGTCAT TCTGGCGGTC ACCGAGGGCG AAGACAAGCC GGCAAAGTAC
CCCCACATGT TTCACGGCGC GGACCTGATC CTGATCAACA AGATCGATCT GCTGCCCTAC
CTTTCCTTCG ACCTGGAACG TTGCCTCGGT TACTTGCACG AAGTCGCGCA TCATGCCGAG
GTGTTGCAGA TCTCCGCCGC CACGGGAGCG GGGTTGGAGC CATGGTTTGC CTGGTTGCGC
GCGCATCGTA ACAGGGCGTT GTCGGAGGCC GGAAAAGTGT TGGCCGGTTC CTGA
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| Protein sequence | MHDHAAHSHA HGGAGFHLHP HPHVPADGDA HLVSLEARIL DKNDRLAERN RGWLAGRGVF
SLNLMSSPGA GKTTLLEKTL AELAGEFPLA VVEGDQETTH DAERIRQAGC NVVQINTGQG
CHLEADMVAQ GLQEIDPAAG SVVFIENVGN LVCPALFDLG EAARVVILAV TEGEDKPAKY
PHMFHGADLI LINKIDLLPY LSFDLERCLG YLHEVAHHAE VLQISAATGA GLEPWFAWLR
AHRNRALSEA GKVLAGS
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