Gene AFE_0674 details

Gene Information

• Locus tag: AFE_0674
• Symbol: iscU
• ID: 7135205
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 603213
• End bp: 603644
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643529080
• Product: FeS cluster assembly scaffold protein IscU
• Protein accession: YP_002425162
• Protein GI: 218666957
• COG category: [C] Energy production and conversion
• COG ID: [COG0822] NifU homolog involved in Fe-S cluster formation
• TIGRFAM ID: [TIGR01999] FeS cluster assembly scaffold IscU

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.589513
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATACA GTGAAAAGGT GATCGATCAT TATGAACATC CCCGCAACGT GGGGGCACTG 
GACAAGGATG ACAGCGGCGT CGGCACCGGT ATGGTGGGTG CACCGGCCTG CGGCGATGTG 
ATGCGTTTGC AGATCAGGGT GAACGGGCAG GGCATTATCG AAGATGCCAA GTTCAAGACC 
TATGGCTGCG GTTCGGCCAT TGCGTCCAGT TCGCTGGTGA CGGAGTGGGT CAAGGGCAAA 
ACCCTCGATG AAGCGATGGC CATCAAGAAC AGCCAGATCG CCGAAGAGCT GGAACTGCCT 
CCGGTCAAGA TTCACTGCTC CGTGCTGGCC GAAGACGCCA TCAAGGCGGC GGTGGAGGAT 
TACCGCAAAA AGCAGGGTGG CGCGTCGACG GCGGCGCAAC CGGAAATGGC CGGTGCCCAG 
GCGGCACACT AG 

 

Protein sequence

MAYSEKVIDH YEHPRNVGAL DKDDSGVGTG MVGAPACGDV MRLQIRVNGQ GIIEDAKFKT 
YGCGSAIASS SLVTEWVKGK TLDEAMAIKN SQIAEELELP PVKIHCSVLA EDAIKAAVED 
YRKKQGGAST AAQPEMAGAQ AAH