Gene AFE_0672 details

Gene Information

• Locus tag: AFE_0672
• Symbol: iscR
• ID: 7134428
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 601415
• End bp: 601903
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643529078
• Product: iron-sulfur cluster assembly transcription factor IscR
• Protein accession: YP_002425160
• Protein GI: 218666431
• COG category: [K] Transcription
• COG ID: [COG1959] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR00738] rrf2 family protein (putative transcriptional regulator); [TIGR02010] iron-sulfur cluster assembly transcription factor IscR

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.468922
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTGA CGACAAAAGG ACGCTACGCG GTGACCGCCA TGCTGGATCT GGCACTCAAT 
CAGCGTGGCG GTGTGGTGAC CGTGGCCGAT ATCTCGCAGC GTCAGCAGAT TTCTGTGGCT 
TACCTGGAGC AGCTCTTTGG GCGGCTGCGC CGTTTTGGTC TGGTGGAAAG TGTACGCGGG 
CCGGGCGGCG GTTACCGACT GGCCATGCCG GACTCGGAGA TTCCGTTGAC GCGGATTGTG 
GAGGCCGTCA ATGAGTCCAT CAGTACGACC CAGTGTGGTG GTGACCCGCA TCTGTGTTGT 
AAGGGGGATG GGCAGCAGTG CCTTACTCAC GACCTGTGGG AAGAATTGGG AAATCGTATC 
GCCGAGTTTC TCGGGGGGAT TACCCTTGGT CAACTGGTAC AGAAGCAGTT GCACAAGGAG 
TTGATGCAGG CAGCTCCGAT CGCGATGACG GATAAAACAC CACTGCGCGA GACGCATGAC 
ACCGCTTAA 

 

Protein sequence

MKLTTKGRYA VTAMLDLALN QRGGVVTVAD ISQRQQISVA YLEQLFGRLR RFGLVESVRG 
PGGGYRLAMP DSEIPLTRIV EAVNESISTT QCGGDPHLCC KGDGQQCLTH DLWEELGNRI 
AEFLGGITLG QLVQKQLHKE LMQAAPIAMT DKTPLRETHD TA