Gene AFE_0662 details

Gene Information

• Locus tag: AFE_0662
• Symbol: ilvD-2
• ID: 7137288
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 592517
• End bp: 594358
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643529068
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_002425150
• Protein GI: 218668120
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.587488
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAGCCCG GCGAGCGTCT ACTTCTTGGC CTGTCTCACG CTAGGCCCTA TACTGCGGAT 
ACTAACCAGA CGGTCAGTGT GCCTTTACTC GGCACACGGC CACGCTGCCA TCGTGGGTGG 
CATCCACGCG ATGCATCCCC TTGCCGAACT TGCCACGAGG ACCTCATGCG CTCCGATATG 
ATCAAAAAGG GTTTTGAACG CACTCCTCAC CGCGCCCTGC TCAAGGCCTG CGGTGTCACC 
GACCAGGATA TGGATAAGCC CTTCATCGGA GTGGCCAACT CGTTCATCGA CATTATTCCC 
GGCCATGTGC ATTTGCAGGA GTTCGGACGC ATCGTCAAGG AGAACATCCG TGCGGCAGGG 
GGTGTGCCCT TCGAGTTCAA TACCATCGGT GTGGATGACG GCATCATCAT GGGGCACGAC 
GGTATGCGTT ACTCGCTCCC GAGCCGTGAG CTGATTGCGG ACTCCATCGA GACGGTGGTG 
CAGGCCCATC ATCTGGACGC GCTCATCTGT ATCCCCAACT GCGACAAGAT CGTGCCCGGT 
ATGATCATGG GCGCGCTGCG CTGTGACGTC CCCACGGTGT TCGTCTCCGG CGGCCCTATG 
GAGGCCGGTC ATCTGTCTGA CGGAACGGCG ATCGATCTGG TGACGGCCTT TGAGGCGGTC 
GGCCAGTTCA AGCGCGGGCA GATCACCCAA ATCCGTCTCA AAGAGATCGA GGACAAGGCC 
TGTCCGACTT GCGGCTCCTG CTCCGGCATG TTCACGGCCA ACAGTATGAA CTGCCTGATG 
GAGGTCCTCG GTATCGCGCT GCCGGGCAAC GGTACCATCC TGGCGACGGC GGCGGCGCGC 
CGCGACTTGG TGCGGCAGGC TGCGGATCGT GTGGTGGCCC TGGCCATGGC GGGCGGCCCG 
ACCATGCGGC AACTGGTGGA TTTCGATGCC ATCGATAATG CGTTCATACT GGATATGGCC 
ATGGGCGGTT CCACCAACAC GGTGCTGCAC ACCCTGGCCA TCGCCCGGGA GGCCGGTCTG 
GATTATCCCC TGGCGCGGCT GAACGATCTG GCGCAGAAGG TGGCCTACCT TGCCAAGATA 
TCGCCCGCCC TGTCCACGGT GCATATCGAG GACATCGGCC GTGCCGGTGG TATCCCGGCC 
ATCCTCCATG AGGTCCACAA GCGCAACCCC GATGTGCTGC ATCTGGATAA GCCGACAGTG 
AGTGGTCAGA GCCTGCGCGA GATCGTATCG GCGGCGGCGG TCAAGGATAG CAGGATCATC 
CATCTGGCCA GCGATCCCAT TTCACCCACC GGCGGCCTGC GGGTGGTCTT TGGCAATCTC 
GCGCCGGAAG GCGGTATCGT CAAAATCGGT GCGGTATTGC CCGCGATGCG CAAGTTCTCC 
GGGCCAGCGA AGATTTTTGA GAGTATGGAA ACGGCGGCAG ACGGTATTCT TGCCGGTGAG 
GTCAAGGGCG GTGATGTGGT GGTGATCCGT TACGAAGGCC CGAAGGGTGG CCCCGGAATG 
CCGGAGATGC TGACGCCTAC CGCCAACATC ATGGGTATGG GCCTGGGCGA AAGTGTGGCA 
TTGATTACCG ACGGCCGTTT CAGTGGAGCA ACTCGCGGGG CCTGTATCGG CCACATCTCC 
CCGGAGGCGG CGGAGGGCGG CCCCATCGGT CTGTTGAAAG ATGGTGACAT GATTTCTCTT 
GACCTCGACA ACGGCAAAAT TCATGTCGAC CTGAGTGACG AGGAATTGGC CGAACGCCGC 
AAACATTGGG TGCCGATAGA AAAGCCCCTG AAGTCACCGT GGTTGCGCCG TTATCGTAAG 
CTGGTGACTA ACGCCGCCAA CGGCGCGATC CTGGAGTCCT GA 

 

Protein sequence

MQPGERLLLG LSHARPYTAD TNQTVSVPLL GTRPRCHRGW HPRDASPCRT CHEDLMRSDM 
IKKGFERTPH RALLKACGVT DQDMDKPFIG VANSFIDIIP GHVHLQEFGR IVKENIRAAG 
GVPFEFNTIG VDDGIIMGHD GMRYSLPSRE LIADSIETVV QAHHLDALIC IPNCDKIVPG 
MIMGALRCDV PTVFVSGGPM EAGHLSDGTA IDLVTAFEAV GQFKRGQITQ IRLKEIEDKA 
CPTCGSCSGM FTANSMNCLM EVLGIALPGN GTILATAAAR RDLVRQAADR VVALAMAGGP 
TMRQLVDFDA IDNAFILDMA MGGSTNTVLH TLAIAREAGL DYPLARLNDL AQKVAYLAKI 
SPALSTVHIE DIGRAGGIPA ILHEVHKRNP DVLHLDKPTV SGQSLREIVS AAAVKDSRII 
HLASDPISPT GGLRVVFGNL APEGGIVKIG AVLPAMRKFS GPAKIFESME TAADGILAGE 
VKGGDVVVIR YEGPKGGPGM PEMLTPTANI MGMGLGESVA LITDGRFSGA TRGACIGHIS 
PEAAEGGPIG LLKDGDMISL DLDNGKIHVD LSDEELAERR KHWVPIEKPL KSPWLRRYRK 
LVTNAANGAI LES