| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0654 |
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| Symbol | |
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| ID | 7135925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 584496 |
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| End bp | 587003 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643529060 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_002425143 |
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| Protein GI | 218666272 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCACCC GGATTCCATG GCAAGCGGCC GTATGGCGCC CCCTCCGCCA GAGGCCGGGG
GCGAGCGTGC TGGCGATCAT CGGCATTGCG CTGGGGGTCG CGCTCGGACT GGCCATCGCC
CTTATCAACA TCCAGGCCGT AAGCGATTTT TCTGCCGGGC TGCGGCGCCT GTCGGGGCAG
GCCGACCTGG CCCTGACGGC GCCGGGGCAG AGCTTTCCCG AACAATGGTA TGTGCGCCTG
AGTATGGCCA GAGATGTGGC CGTGGCCACC CCGGAAATCC GCTTGCAGGC GCAGGTACTG
CATCCTGCCC GGAAGGGCAT GCTCCCCATT CTCGGCATTG ACGCCTTCCA GGCGGCGCGC
ATGGGACAAC CGCTGCTGCC TTTCAATCTG CATAGCCCGC TTGCCCTGCT GACCCCCGAC
CACATTGCCC TGAGCCAGGC GGCGCTGACA CGTCTCGGCC TGCGGGTAGG GGATACGCTG
ACGCTCGACG CGGACGGACA GCCACGCACA CTGCGAATCA TCGGCGAACT GCCGGGTGTG
GGCAACAGCG AAGCACTCGG CGTCATGGAT ATTGCCGCAG TACAGTGGCT GTGGGGAAGG
ATCGGCACCC TCAATCAGGT CGACCTGCGT CTGTATCCGG GAATACCCAT CGCTCATTTT
CTCGCGCAAT GGCAGGGGCA TCTGCCGGTC GGCGCGGTGT TACAAAGCCC GGCGCAGCAG
GGACACGTGG CTGCGGATGC TTCGCGCGCC TATCGCGTGA ACCTGCTGGT ACTATCGCTG
GTAGCGTTGT TTACCGGAGC GTTTCTCGTC TATTCCACCC TGGCCATGGG GGTAGTGCGG
CAACGGCAGC AACTGGCCCT GTTGCGGGTC CTGGGCCTGC GCCGCCGGGA AGTCGTACTG
GCCGTATTGT TGCAGGGTGC GACGTTGGGT CTGCCGGGCG CGCTGCTGGG TCTGCCGCTG
GGCGTGCTGG CGGCTTGGCT GGCTCTGGCA CACATGGGTG GCGACCTCGG AGCAGGATAT
TTCAGTGCCA CGGCTTTGCA CTTGCAATGG CATCCGGGAC TCCTGCTGAT CTTTTTCGTG
GCGGGCCTGG GAGCGGCGCT GACCGGCGCC TTTTTACCAG CTTGGGAAAC CAGCCGGGCG
ATCCCCGCCC TGGCGTTGCG GGCCGGCTCT GAAGAGCAGG CCCATCAGCA GCACCAACAT
CCCTGGGTAG GTCTGCTGCT CTTGGGACTG GCCTTGGCAG GGTCGTTGGC GCCGGCCATC
CACGGCATCC CCTATCTAGC CTACGGCGCG GTAGCCTGCC TGCTCTTTGC CCTGCTCTTT
TTACTGGCCC CGCTCCTGCG CGCACTGACC AGGCTCTTTC CCCTGCCCCA TGCCCCCGTC
TGGCGTCTGG CCCTGGAACA ACTGCGGGGT GCGCCGGGGC GGGCGGCGCA AAGCCTGGCT
GCAGTGGTAG TGGCCTTCAG TCTGGTCGTG GCCATGGCGG TGATGGTGGG TTCATTCCGT
GACTCCGTCG CCAACTGGTT GACCGACATT TTACGCGCGG ACCTCTATGT GCAGGCTGGG
ATGAATAGAG ACTCACTCCT CCCCCATGGC GCAGCGCACC AGCTTTGTGC ACTGCCCGAT
GTCCGCGCCT GCTCGCCTCT GCGGCGGGTC ACTCTAAATT TGTTACCGGG ACACCCACCG
GTGACGCTTC TCGCGCGGGG CATGAACATC AGCGATCCGG AGCGGGAATT GCAGATACTC
CATGCGGTCA GGGTCGGGCC ACAACAGCCA CCGCCCGTGT GGATTTCGGA GATTCTGGCA
GGTATCAGTG GCTGGCAGAC CGGACAGGTG ATCCATCTGC CGCTGGGTGG GCAGGAGCGG
CCGGTGACCA TCGCCGGCAT CTATCGGGAT TACGCCTATC AGGAGGGTTC AGTGTCCATA
CCCATTCAGC AATACCGCGT ATGGTCCGGA GACGATGCGG TCAATGGCGT CGCCCTTTGG
CTGCGTCCCG GCACTGCGAT ACCGGCCGCC ATCCACAAGT TGCGGCAGAC ACTGCCCGAT
GGTGGTCGAT TATTGATCGC GACCCCCAAA GAAATTCGCA GCAAGAGCCT GCAGATATTC
AACCAGAGCT TTATCGCCAC CTATGCACTG GAGGCTGTCG CCATGGTGAT CGGGCTGCTG
GGGGTGAGCA GCGGCTTCGG GGCGCAGACG CTCATGCGCC GCAGCGAATT CGCCATGCTC
CGGCATCTGG GTCTGCGGCG GCGTGACCTG CTCACCTTGC TCTTTGCCGA GGGCAGCGTC
CTTTCGCTAC TCGGAATACT CATCGGCGGT GCACTGGGGA TGGCCATCAG CATCATCCTG
ATCGAAGTGG TCAATCCCCA GTCTTTCCAT TGGCACATGG GCTTTCATCC GTCCTGGCCG
CTATTGCTGA CCCTGAGTGC CATCCTCTGG CTGGCGAGCA CGGCCACCAT GGTGCTGGCC
GGACGGCGGG CGGTCCGGCA TACCTCCGCG GTGCTGCGCG ATGATTAG
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| Protein sequence | MITRIPWQAA VWRPLRQRPG ASVLAIIGIA LGVALGLAIA LINIQAVSDF SAGLRRLSGQ
ADLALTAPGQ SFPEQWYVRL SMARDVAVAT PEIRLQAQVL HPARKGMLPI LGIDAFQAAR
MGQPLLPFNL HSPLALLTPD HIALSQAALT RLGLRVGDTL TLDADGQPRT LRIIGELPGV
GNSEALGVMD IAAVQWLWGR IGTLNQVDLR LYPGIPIAHF LAQWQGHLPV GAVLQSPAQQ
GHVAADASRA YRVNLLVLSL VALFTGAFLV YSTLAMGVVR QRQQLALLRV LGLRRREVVL
AVLLQGATLG LPGALLGLPL GVLAAWLALA HMGGDLGAGY FSATALHLQW HPGLLLIFFV
AGLGAALTGA FLPAWETSRA IPALALRAGS EEQAHQQHQH PWVGLLLLGL ALAGSLAPAI
HGIPYLAYGA VACLLFALLF LLAPLLRALT RLFPLPHAPV WRLALEQLRG APGRAAQSLA
AVVVAFSLVV AMAVMVGSFR DSVANWLTDI LRADLYVQAG MNRDSLLPHG AAHQLCALPD
VRACSPLRRV TLNLLPGHPP VTLLARGMNI SDPERELQIL HAVRVGPQQP PPVWISEILA
GISGWQTGQV IHLPLGGQER PVTIAGIYRD YAYQEGSVSI PIQQYRVWSG DDAVNGVALW
LRPGTAIPAA IHKLRQTLPD GGRLLIATPK EIRSKSLQIF NQSFIATYAL EAVAMVIGLL
GVSSGFGAQT LMRRSEFAML RHLGLRRRDL LTLLFAEGSV LSLLGILIGG ALGMAISIIL
IEVVNPQSFH WHMGFHPSWP LLLTLSAILW LASTATMVLA GRRAVRHTSA VLRDD
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