Gene AFE_0638 details

Gene Information

• Locus tag: AFE_0638
• Symbol: greA
• ID: 7136829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 569442
• End bp: 569918
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643529044
• Product: transcription elongation factor GreA
• Protein accession: YP_002425127
• Protein GI: 218665891
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGATA AAATTCCCAT GACGGTTATT GGTGCCCAGC GGCTGCGCGA CGAGTTGCAT 
CGCCTCAAAA CCGTTGACCG CCCTACGGTG ATTGAAGCCA TTGCCGAGGC GCGCGCCAAG 
GGTGATCTGT CGGAAAATGC CGAATATGAC GCCGCCAAGG AGCAGCAGGC TTTTATCGAA 
GGACGTATCC GTGAGGTGGA GGATTATCTG GCCCGTGCCC AGGTCATCGA CCCCAAGCAA 
CTGAATACCG GCGGTAAAAT CGTTTTTGCG GCCACTGTGG AATTGGAAGA TGCGGAAGGC 
AACGAGGTGA CCTACCAGAT CGTGGGTGAT GCCGAGGCCG ACCTCAAGGA AAACAAGATA 
TCCATCAGTT CCCCCATTGC CCGCGCGCTC ATCGGCAAGC ATGAAGGCGA TCCGGTTGAA 
GTGCGCGCCC CCGGCGGAAC ACGGGAATAC ACCATTCTTG CCGTGCGTTA CATATAG 

 

Protein sequence

MNDKIPMTVI GAQRLRDELH RLKTVDRPTV IEAIAEARAK GDLSENAEYD AAKEQQAFIE 
GRIREVEDYL ARAQVIDPKQ LNTGGKIVFA ATVELEDAEG NEVTYQIVGD AEADLKENKI 
SISSPIARAL IGKHEGDPVE VRAPGGTREY TILAVRYI