Gene AFE_0637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0637 
Symbol 
ID7135497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp567401 
End bp568603 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content63% 
IMG OID643529042 
Productmajor facilitator family transporter 
Protein accessionYP_002425125 
Protein GI218666493 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCCGT TCGAAAAGCG GGCGGTGGCG GGACTGAGCT TCATCTATGT CGCGCGCATG 
CTCGGTCTGT TCATGCTCAT GCCGGTACTG GCCCTGGACA ACGACCAGCT TCGCCACAGC
ACCCCGGTGC TGTTGGGCCT GGCCATTGGC ATCTACGGAC TGGCCCAGGC CGCCCTGCAG
TTTCCCTTCG GGGTGGCCTC CGACCGTTTC GGGCGCAAGC GGGTACTGGT CTTTGGTCTG
CTGATCTTCG TCCTGGGTTC CCTGCTGGGG GCGGTCACCC ACAACATCTG GGGCATCATT
CTCGCCCGTC TGCTGCAGGG TGCGGGCGCC GTCTCCTCGG TGCTCCTGGC CACCGCAGGG
GACCTCACCG GTGAACAGCA CCGCACCAAG GCCATGGCCG CCATCGGCGG CAGCATCGCC
ATCGCCTATG TTCTGGGGAT GGCGATGGGA CCCGTCTTTT ACGGTCTCTC CGGGCTGACC
GGGGTATTTC TGGTAGCCGC CGCACTCGGC GTCCTTGCGC TATTACCGCT GTGGAAAGTG
ATTCCCCCCA TCCCCCGCAA TCTGCAGCAG CGCATGGGGA ACTGGCGTGA CGCCCTGAGG
ATATTCAGAT ACCCCCCGGT TCTGACCGCC AGTGTCGGCA TCTTCATCCT GCAGATGGTG
CTGGGGGCCA GTTTTGTGGT GCTCTCCCCG GAACTGGTCA AGGCCATGCA CATTCCGGGC
AGCGCCGTCT GGGAAGTGTA TCTGCCGGTG ATGCTGCTCT CGGTGGCGGG CATGCTCTAC
CCGGTGATCC ACGCCGAAAG GCACAGACAG CACGGACAGA TGCTGGTCTT CAGTGGTCTT
GCCATTGCTG CGGGAGCGTT GTTCATGGGT TTGCTCGCTG GTCACTTCTG GCCGGTGGCG
GTAGGAGCGG TGATTTTCTT CACGGGTTAT AACGTGGCCT CGGCGATTCT GCCCTCGATG
ATGAGCCGCA GCACCACCCA GGAACAGCGG GGGGCGGCCA GTGGTGTGTA CTCGCTGATG
CAGTTTCTGG GGATATTCGC GGGGGGTGTG GTCGGTGGCT GGGGGCTGGG CATGGCCGGC
GAGCAGGGTG TCTTTTATCT CCTTGCCGTC GTCGGATTGC TCCTCGCCCT GCAAAGCTGG
AACGGAAAAC GCGTGGCACT ATTGCTGGAA CCGGACGCCC GGGAAGCAGG GGACGGTCAG
TAG
 
Protein sequence
MSPFEKRAVA GLSFIYVARM LGLFMLMPVL ALDNDQLRHS TPVLLGLAIG IYGLAQAALQ 
FPFGVASDRF GRKRVLVFGL LIFVLGSLLG AVTHNIWGII LARLLQGAGA VSSVLLATAG
DLTGEQHRTK AMAAIGGSIA IAYVLGMAMG PVFYGLSGLT GVFLVAAALG VLALLPLWKV
IPPIPRNLQQ RMGNWRDALR IFRYPPVLTA SVGIFILQMV LGASFVVLSP ELVKAMHIPG
SAVWEVYLPV MLLSVAGMLY PVIHAERHRQ HGQMLVFSGL AIAAGALFMG LLAGHFWPVA
VGAVIFFTGY NVASAILPSM MSRSTTQEQR GAASGVYSLM QFLGIFAGGV VGGWGLGMAG
EQGVFYLLAV VGLLLALQSW NGKRVALLLE PDAREAGDGQ