| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0565 |
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| Symbol | spoT |
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| ID | 7134785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 502012 |
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| End bp | 504216 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643528972 |
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| Product | guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase |
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| Protein accession | YP_002425057 |
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| Protein GI | 218666350 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCCTGC CGCCGGTCTC TCCGTCTCTG GAGGACCCCT GCGCGCCGCT GCGGGCGTTG
CTTCAGCAGT ACATGACGCC AGAAGAAGTG TCGCGCGCAC GTGATGCCTA CGAATTGGCC
GCCAACGCAC ATGGCGCACA AACCCGGCGC AGTGGTGAGC CCTATATTCA TCATCCCGTG
GCGGTCGCCT GCATCCTCGC CGAGCTGCAA CTGGATATTT TCACTATTCA GGCGGCCCTG
CTTCATGACG TGATCGAAGA TTGCAATATC AGCAAGGAAA ACATCACCGA GCGCTTCGGG
CCGGAAGTGG CAGAGATGGT GGATGGGGTC AGTAAGCTGG GGCAGGTACG TTTTGAAACC
CGTGAAGAGG CACAGGCAGA GAATTTTCGC AAAATGTTTC TGGCCATGTC CCGGGACATC
CGGGTCGTGT TGATCAAGCT GGCAGATCGC TTGCACAACA TGCGCACCAT GGGCGTGATG
ACGCCGGAGA AGCGGCGGCG TATTTCCCGG GAAACCCTCG ATATCTACGC GCCCATTGCG
CAACGCCTGG GTATTCATGC CATTCGCATC GAGCTGGAGG AGCTGGCCTT CTCCCACCTT
TACCCCAAGC GTTGGCACAC GCTCAATGAG GCCGTAAAGG CCGCGCGTGG TAACCGTAAG
GAAGCGGTGC AGAAAATTGA GCATGCCCTG GAGGACCGCC TCCTGCAGGA GGGCTTCGCC
GCCCAGGTCA GTGGCCGTGA GAAACACGTC TACAGTATCT ACAGAAAAAT GCAGAAGAAG
GGTATGCCCT TCGGTGACAT CCACGACCTC CACGCCTTCC GGATTATTGT TGCTGATGTG
GATACCTGCT ATCGCGTTCT GGGTCTGGTT CACAGTCTGT ATCGACCGAT TCCCGGACGT
TTCAAAGACT ACATCGCCAT TCCGAAATCC AATGGATATC AGTCTCTGCA CACCGTGCTG
CTGGGCCCTT TCGGGCATCC GGTAGAGGTG CAGATCCGCA CAGAGGATAT GCACCGGGTC
GCCGAGGCGG GGGTGGCTGC ACACTGGCTG TACAAGACGG GCTCGAATAA CGCCCATGCC
GAAATTCAGG CGCGTGCCTG GTTGCAGCGT TTACTGGAAC TGCAGATACA GGGGGGAGAT
TCCCAGGAAT TTCTGGAAAG CGTCAAGCTC GATCTTTTTC CCGATGAGGT CTATGTTTTC
ACCCCCAAGG GTAAAATTCT CAGCTTGCCA CGGGGTGCGA CGGCGGTGGA TTTTGCTTAC
GCCGTGCATA CGGATATCGG TGACCAGGCC GTGGCGGCCA GAGTCAATGA TATGTACGTT
CCCTTGCGCA GTCCTCTGAA CAACGGCGAT AAAGTGGAAA TCGTCACGGC GGCCTCGGCG
CACCCGCAAC CCGGTTGGCT GGATGTGGTG GTGACCGGCA AGGCGCGCAG CAGCGTTCGC
GCTTATCTCA AGACCATTCA GCGTGGCGAC GCGGAAGTGC TGGGTCGCAA TTTGCTGGAA
AAGGCGCTGC AGAGTCTGGG TGCCGACCTC CAGCAGATCG AAGCGACTGA TTTTCAGCGG
GTGCTGGTGA CGTTCAACGT GCAGGATGAG AGCCAGCTGT TGGCGGCCAT TGGCATGGGT
GAGGTTTTTC CGCTGGTCGT AGCGCACAAG CTGCTGCCCG AGGAGGGCGA TCGCGGGCGG
CTGGCGCAGA CTGCCCGCCG TCTGGGCCAT GCCGTCAGCC AGCTCCTGCC AAGTCGCCTC
AGTCGCGAGG AGGCCACGAA AAAGCCCTTG CTGATTCGGG GGACGGAAGG TATGCCAGTG
ACCCTGGCTC GTTGCTGTCG TCCCATCCCT GGCGACCCTA TTTTGGGTTT CATCAGTGTC
GGCAAGGGTG TGGTGGTACA TACCCATGAT TGTCACAATA TTCGCGAGTG GCGCAAACGC
CGTGACCGCT GGGTGGACGT GCAATGGGAT CCCGCAGCCC AAGGCGAGTT CCCGGTCGCG
ATCCGGGTGG TTGCGGAGAG CGCCCGCGGC GTACTGGCGC GCATTGCCAC CCTGATTTCC
GATGAGGATT CCAACATCGA TCATGTGGAT ATCGAGCCGC AGGATGGACT CTACACGGGC
ATCACATTTA CCATAGAGGC GCATGACCGC GACCACCTGG CCAGAATCAT GCGGAGTTTG
CGCAGTTTGC CCATGGTGTC GCGGGTACAG CGGGTCAAAG GCTAA
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| Protein sequence | MRLPPVSPSL EDPCAPLRAL LQQYMTPEEV SRARDAYELA ANAHGAQTRR SGEPYIHHPV
AVACILAELQ LDIFTIQAAL LHDVIEDCNI SKENITERFG PEVAEMVDGV SKLGQVRFET
REEAQAENFR KMFLAMSRDI RVVLIKLADR LHNMRTMGVM TPEKRRRISR ETLDIYAPIA
QRLGIHAIRI ELEELAFSHL YPKRWHTLNE AVKAARGNRK EAVQKIEHAL EDRLLQEGFA
AQVSGREKHV YSIYRKMQKK GMPFGDIHDL HAFRIIVADV DTCYRVLGLV HSLYRPIPGR
FKDYIAIPKS NGYQSLHTVL LGPFGHPVEV QIRTEDMHRV AEAGVAAHWL YKTGSNNAHA
EIQARAWLQR LLELQIQGGD SQEFLESVKL DLFPDEVYVF TPKGKILSLP RGATAVDFAY
AVHTDIGDQA VAARVNDMYV PLRSPLNNGD KVEIVTAASA HPQPGWLDVV VTGKARSSVR
AYLKTIQRGD AEVLGRNLLE KALQSLGADL QQIEATDFQR VLVTFNVQDE SQLLAAIGMG
EVFPLVVAHK LLPEEGDRGR LAQTARRLGH AVSQLLPSRL SREEATKKPL LIRGTEGMPV
TLARCCRPIP GDPILGFISV GKGVVVHTHD CHNIREWRKR RDRWVDVQWD PAAQGEFPVA
IRVVAESARG VLARIATLIS DEDSNIDHVD IEPQDGLYTG ITFTIEAHDR DHLARIMRSL
RSLPMVSRVQ RVKG
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