Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0557 |
Symbol | ribF |
ID | 7136883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 496173 |
End bp | 497105 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643528964 |
Product | riboflavin biosynthesis protein RibF |
Protein accession | YP_002425049 |
Protein GI | 218668108 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0196] FAD synthase |
TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.689401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCCT TCCTCCACCA CCGCAGCAAC CGCGCCGCTG ACCTGCCTCA GGCAGTCAGC ATCGGCAATT TCGATGGGGT GCATCGCGGC CATCAGGCAC TGCTGAAAAC CATGCAGGAT AGCGGCCTGC CCACTGCGGT GCTCACCTTC GAGCCCCTTC CCCGGGAGTT TTTCCGAGCT GCGGACGCGC CACCACGATT GAGCAGTTTG CGCGAGAAGG TGGTGGCACT CCGCCACAAT GGGGTACAGA GCATCACTTG CCTGCCCTTC AATCAGGCGC TGGCCAACCT GCCCGCCGAG GATTTCATTA CTCAGATACT GGTCAGGCAA TTGTGCTGCG GGCTGCTGAG CGTCGGCCAT GACTTCCGCT TCGGGGCGAG ACGGCGCGGT GATCTGGACA TGCTCAGCCG CTTCGGGCGA CAGTATGGGT TTTCGGTGAA AGAGCAGCCC CCCTTTCTGC TCGACGGCCA ACGGGTCAGC AGCACCGGCA TCCGCGCCTT TCTGCAGAGC GGCGACCTGA CCCATGCGGC GTCCTGGCTG GGACGTCCCT ATGCCCTCTG TGGGCGGGTC GTGCATGGCG ACCATCTAGG TCGGGAACTG GGCTTCCCGA CCGCCAACAT CCCTCTGAAT CGTCGCCCGG TGCCCGTCAA AGGTATCTTT GCCGGACGCC TGTTGAGTCC GAAAGGAAAC TGGATCGCCG CCGTCAGTAT CGGTCTGCGC CCCACCGTCG GCGGCAAACA GATGGTACTG GAGGCCCACT GTCTGGATGC GGACAGCCCC GACCTCTACG GACAGCAGGT TTCCGTGGAG CTGCACCACA AGCTGCGGGA CGAAGAGAAA TATATGGATC TCGATACCCT CAAGGCGGCC ATCGACAACG ATGTCGTGAA CACCCGGAAC TTTTTCGCCG AACATCCCCA GGACTTTGAA TAA
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Protein sequence | MHSFLHHRSN RAADLPQAVS IGNFDGVHRG HQALLKTMQD SGLPTAVLTF EPLPREFFRA ADAPPRLSSL REKVVALRHN GVQSITCLPF NQALANLPAE DFITQILVRQ LCCGLLSVGH DFRFGARRRG DLDMLSRFGR QYGFSVKEQP PFLLDGQRVS STGIRAFLQS GDLTHAASWL GRPYALCGRV VHGDHLGREL GFPTANIPLN RRPVPVKGIF AGRLLSPKGN WIAAVSIGLR PTVGGKQMVL EAHCLDADSP DLYGQQVSVE LHHKLRDEEK YMDLDTLKAA IDNDVVNTRN FFAEHPQDFE
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