Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0552 |
Symbol | |
ID | 7136137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 490047 |
End bp | 491810 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643528959 |
Product | ABC transporter, permease/ATP-binding protein |
Protein accession | YP_002425044 |
Protein GI | 218667838 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAGT TTAACGGCGC ATTCTTTCGT GACCTGTGGC GGATGGTCAA ACCTTACTGG TGGCACTCCG AGGAGCGCTG GGTGGCGCGC GGGGTCTTTG CCTTCATCAT TCTCCTCAAT CTGTTCATGG TGTTTATTTC TTATCGCATC ACGGAGTGGT ACGCGGTGTT CTGGAACGCC CTGCAGCGCT TTGCGGTGAA CGCCGCCTGG CACCAGATGC TGATTTTTCT GGGACTGGCC ACTCTCTATA TCATCGCCGC GGTCTCCCAG ACCTTTTTTA CCCAGATGCT GGAAATTCGC TGGCGGCGCT GGCTGACGCG GCAGTATCTG GATTCCTGGC TCGCCAAAAG TACCTTTTAC CATATGCAGG TGCTGGGCGA TGGTACCGAC AACCCGGATC AGCGTATCAG CGAGGATCTG GCCAGTTTCA CCGGGCAGAC ACTCAACATC GTGATAGGCC TGCTCAGTTC CGCCACGACC CTCGCCGCCT TTGTGTTCAT GCTTTGGAAT TTGTCGGCCA TGATCACCAT TCCCTGGCAG GGGAGTATCT ATACCATCCC CGGCTATCTG GTCTGGGCGG CACTCATTTA TTCGGTGCTC GGCACCATCC TCACCGCCCT CATCGGGCGG CCGCTGATCA GTCTGAACTT CAACCAGGAG CGCTATCAGG CGGATTTCCG TTTCAGTATG ATGCGCCTGC GGGAGAATAG TGAAAGCATT GCCCTCTACG GTGGGGAAAC GGAGGAGCGT CATCATTTTC TGCAACGGTT CGCCAACGTC TATGCCAACT ACTGGCGGAT TATCTGGCGG TCCATGCGTC TCAACTGGTG GGTGTCCGGT TATGGTCAGG TGGCGATCAT TTTCCCGATT CTGGTGAGCC TGCCCGCCTA TTTCGTCAAT AAGGCCATCG GCATTGGTGG CTTGCAGCAG ATTGCCTCGG CTTTTGCCCA GGTGCAGGGT GCGCTGTCTT TCATTGTCAG TAGTTATGGC AGCCTCGCCA ACTGGCACGC GGTCGTCGAC CGTCTACGTT TTTTTGAACA GTCGATGGAC GAGGTGCGGG TCATCCGGGA GACCCATTAC CAGATCGAGC ACAAGGATGG TCCGCGGCTC ATTGTGCGGG CCCTCAACGT GCGCCTGCCC GATGGCCGGG AATTGATTCA TCACCTGGAT CTGGATGTGC GCCGCGGTGA GCGCCTGCTG ATCATGGGCC CGTCAGGCGG AGGCAAAAGC ACACTGGTAC GCGCTCTGGC CGGTATCTGG CCTTTTGGTG AGGGGGAGGT GAAACTGCCC CGGAGCGACC GCCCGCTCTT CCTGCCGCAG AAGCCGTATC TGCCCCTGGG TACTTTGCGC GATGTACTGG TCTATCCCTT CGGGGTGCCC GGCGTCGGAG ACGCCCGCCT GCAGCAGGTG CTCCATCTGG TCGGCATGGA GGCGTTGGCC GACAAACTGG ATGACGCCCG TTTGTGGTCT CATGTATTAT CTCTGGGGGA GCAGCAGCGT CTGGCCTTTG CCCGTATTCT ATTGCAAAAG CCGCAGTGGG TGTTTTTGGA CGAGGCCAGT TCGGCACTGG ATGAACCCGC CGAGGACGCG CTCTACCACA TGCTTGTCGA GGAACTGCCG GAAACCGCCA TCATCAGTGT CGGTCACCGC TCCAGTCTGT TGCGGCATCA TGAGCATTGC CTGCATCTGC TGGGTGACGG ATCCTGGCGT CTGGAGGCCG TCGTCCATCC CGTTCCCGGG GGGCAGCAGC CGGCACTGGC CTGA
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Protein sequence | MKQFNGAFFR DLWRMVKPYW WHSEERWVAR GVFAFIILLN LFMVFISYRI TEWYAVFWNA LQRFAVNAAW HQMLIFLGLA TLYIIAAVSQ TFFTQMLEIR WRRWLTRQYL DSWLAKSTFY HMQVLGDGTD NPDQRISEDL ASFTGQTLNI VIGLLSSATT LAAFVFMLWN LSAMITIPWQ GSIYTIPGYL VWAALIYSVL GTILTALIGR PLISLNFNQE RYQADFRFSM MRLRENSESI ALYGGETEER HHFLQRFANV YANYWRIIWR SMRLNWWVSG YGQVAIIFPI LVSLPAYFVN KAIGIGGLQQ IASAFAQVQG ALSFIVSSYG SLANWHAVVD RLRFFEQSMD EVRVIRETHY QIEHKDGPRL IVRALNVRLP DGRELIHHLD LDVRRGERLL IMGPSGGGKS TLVRALAGIW PFGEGEVKLP RSDRPLFLPQ KPYLPLGTLR DVLVYPFGVP GVGDARLQQV LHLVGMEALA DKLDDARLWS HVLSLGEQQR LAFARILLQK PQWVFLDEAS SALDEPAEDA LYHMLVEELP ETAIISVGHR SSLLRHHEHC LHLLGDGSWR LEAVVHPVPG GQQPALA
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