Gene AFE_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0550 
Symbol 
ID7136373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp487465 
End bp488691 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content61% 
IMG OID643528957 
ProductISAfe3, transposase 
Protein accessionYP_002425042 
Protein GI218666028 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.227474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGC AATCCCTCTT TCACCGGGTT ATCGGACTGG ATGTTCATCA GGCCCAGGTC 
ACCGCCTGTG CCATTCTCAC GGACCCTGAC GGAAACGTTA CGATTGAGCG CCGGCAATTT
GGTGCTTTTC AGAAGGACCG GAAGGCATTG GCCCTGTGGT GTGCCTCCCA TCGGCCCGAT
ACGGTGGTCA TGGAGAGCAC CGGGATCTAC TGGAAGAGTC CCTATGCGGC CCTGGAAAAG
GTGGGGATCC AGGCACAGGT CGTGAACGCC AGGCACGTCA AACAGGTCCC CGGTCGCAAG
ACCGATGTTG GGGATGCAGA GTGGCTCGCC ACCCTGGCTC GAGCCGGACT GCTGCGGGGT
TCCTTCGTTC CCCCGGCACA ACTGCGGGAG CTGCGGCTGA TCGCCCGACA GCGGCAAAAT
CTGGTGGGCA TGCTCTCGTC GGAGAAAAAC CGCTTGCACA AGGTGCTGAC CGATGGCGGA
ATTCGACTGG GGGTGGTGGT CAGCGATATC CATGGGCAAT CGGCCCGGGC CATGATCCAG
GCCCTGATTC AGGGGAGTCC CCCGGAGGCC GTACTCCGAC TGGCCAGCCG ACGGCTCAAA
GCCAGCCAGG AGGAGATCCT GGATGCCCTG CAAGGCGAGT TGAGTGCCAG TCACCGCTTT
GTCCTGGACG AGACGCTCCG CCATATCGAG TCTCTGGAGG CCCAAATCGC GCGCTTCGAT
GTCCAACTGC TGGAGGGCTT GAAGCCGCAA AAGAATGCTC TCGAACTCCT GCAGACCTTG
CCGGGCATCG ATACCGTGGG TGCTGCCTTG CTGCTGGTCG AAATCGGAGA CGACATGAGC
GTCTTTGGGA GCGCCGATCG ACTGGCCTCC TGGACCGGCC TTTGTCCCGG GAACAATGAG
TCTGCCGGAA AACGGAAAAG TGGGCGAACC CGCAAGGGCA ACCCGTATGT CCGTCGGATC
CTCTGCGAAT GCGCCCACGC CGCCAGTCGT ACCCACTGCG CCCTGCGCTC CAAGTTCCAG
AGTCTGGTCG TCCGTAGGGG GCACAAGCGC TCCATCATCG CCCTGGCCCA CAAAATGCTG
CGCATCATCT ACTTCATGCT CTCACACGGC AAGTACTACC GGGATGCCGA TACGGACTAT
GAGGCACTGA GTGTGCAGCG CAATGCTTCT CGCTGGATCA AGAAACTGAT CAAATTCGGC
TTCCTGCCGC AGCATCAGCC AGCGTAG
 
Protein sequence
MELQSLFHRV IGLDVHQAQV TACAILTDPD GNVTIERRQF GAFQKDRKAL ALWCASHRPD 
TVVMESTGIY WKSPYAALEK VGIQAQVVNA RHVKQVPGRK TDVGDAEWLA TLARAGLLRG
SFVPPAQLRE LRLIARQRQN LVGMLSSEKN RLHKVLTDGG IRLGVVVSDI HGQSARAMIQ
ALIQGSPPEA VLRLASRRLK ASQEEILDAL QGELSASHRF VLDETLRHIE SLEAQIARFD
VQLLEGLKPQ KNALELLQTL PGIDTVGAAL LLVEIGDDMS VFGSADRLAS WTGLCPGNNE
SAGKRKSGRT RKGNPYVRRI LCECAHAASR THCALRSKFQ SLVVRRGHKR SIIALAHKML
RIIYFMLSHG KYYRDADTDY EALSVQRNAS RWIKKLIKFG FLPQHQPA