Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0545 |
Symbol | dsbD |
ID | 7137311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 477663 |
End bp | 479513 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643528952 |
Product | thiol:disulfide interchange protein DsbD |
Protein accession | YP_002425037 |
Protein GI | 218667063 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.221768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGGA ACGACGTGGG TATGAGAGCC GGAAACGGGA GAAGGGCCGG TTGGGCCATG GGTGTCCAGT TGTGGAGCGG AATTTGCGGT GTCCTGCTAT TGTCCTGGCT GTCTCTCGGC TGTGCCGGTA CGTTTCTGAC CCCGGATCAG GCATTTCATT TTGAAGCGCG GCTGAGTGGC CGGCACCAGT TGCAACTGCA CTGGGATGTG GCGCAGGGAT ACCACCTGTA CCGCGATCGG ATCAAGTTCT CCGTGACGCC GAGCAATGTG CTGCTAGGGC ATTATACATT GCCCGCAGGA GTGGAGCTGA ACGACCCGGT TTTCGGCAAG ACACGGGTAT TGGAAGGGAA AAATACCCTC ACCGTACCTT TTACCGTCCA GGGAACCGCC CCTGCTTTCA TTGAACTGAA ATCTACCTAT CAGGGCTGTG CCAATGCGGG TGTTTGCTAC CCGGAGCAGG TCAAGACGAT CAAGCTGGCC TTGACCCAGC AGGCCGTGCC GCCCCCGGCG GCGGTGCCGG TCGTGCCCCC GCCGGGGACG GCGGTCCCGG CTGCTGCGGT CAGCCCCGTG AATGATGCCG GGGCGCTGGC AGGGGCTTTG CGTGACAGCT TCTGGCTCAC CTTGGGTCTC TTTTTTATCT CTGGACTGGG TCTGGCCTTT ACGCCCTGTA TTTTTCCCAT GATTCCTATC CTCTCCGCCC TGATCGTCGG TAAGGAGGCA GGGCGCGGCC CGCAACGGTC ACGCGCCCTG GGGCTTTCCG TCGCCTATGT GCTGGGAATG TCGCTGACCT ACAGTATTGC CGGGGTGCTG GCGGCGGTGA GCGGCGCCTA TATGCAGGCG GCCTTCCAGA GTCCCTGGGT GCTGGGGGCT TTTGCCTTTG TTTTTGTGCT GCTGGCGCTG TCCATGTTCG ATTTTTACGA GCTGCAAATG CCGAGTGGCA TTCAGACACG TCTGGCCGGC ATGGGACGGG GCGGGCACCT GTTCAGTACC TTTGTCATGG GGGTACTGTC AGCGCTGATC ATCGGGCCCT GCGTGGCCGC CCCCCTGGCA GGCGGGCTGC TCTTCATTTC CCAGACGGGA GATGTTTTTC TTGGTGGATT GTCACTGTTC GCTCTGAGCC TGGGGATGGG CGTGCCCCTG CTGATCATCG GTACTTCCGC CGGGCATTTT CTACCGCGGG TTGGTGCCTG GATGAATGCC GTTAAGGCGG TTTTCGGTGT AGTGCTGCTG GGCGTCGCCA TCTGGTTGCT GACACGAGTT CTGCCGGGGC CCGTCAGCTT GGCCCTATGG GCAGCGCTGG CAGTCATCAG TGCCATCTAT CTCGGGGCGT TGGACGCAAT CCCGGCGGGT GCTTCGGGCT GGCGCCGTTT CTGGAAAGGC CTCGGAGTGC TCATGCTGGT GTACGGCCTG GTCATGGGTG TGGGGGCGCT GGGCGGCGCC AGCGATCCCC TGCAACCCCT GACAGGCTAT ACGGCGGCGG TGCCGCCCGA AAACCGGGCC GAGGCCCTGC ATTTTACTAC CGTGAAAACC CCCGAGGCCC TGCAGAGCGC ACTGGTACAG GCCAGGGGCA GACCGGTGCT GGTGGATTAC TGGGCAAGCT GGTGCGTGGA ATGCCTGCGC ATGGATAAAG TCACGTTTGC CGATCCGCAG GTGGTGGCCG CCCTACGAAA GCGGCTGCTG ATCCGCGTGG ATGTGACTCA GGATGATGCG GCCAGTCGCG CCCTCCTGAA GCGTTACAAC CTGGTGGGCC CCCCGGCTTT CATCGCTGTA GCCGCAGATG GCAGGACGAC GGCGCAGCAG GAGGGATATC TGGGGCCGGA GGCGTTTATG GGGTGGTTGC ACCAATCCTA G
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Protein sequence | MARNDVGMRA GNGRRAGWAM GVQLWSGICG VLLLSWLSLG CAGTFLTPDQ AFHFEARLSG RHQLQLHWDV AQGYHLYRDR IKFSVTPSNV LLGHYTLPAG VELNDPVFGK TRVLEGKNTL TVPFTVQGTA PAFIELKSTY QGCANAGVCY PEQVKTIKLA LTQQAVPPPA AVPVVPPPGT AVPAAAVSPV NDAGALAGAL RDSFWLTLGL FFISGLGLAF TPCIFPMIPI LSALIVGKEA GRGPQRSRAL GLSVAYVLGM SLTYSIAGVL AAVSGAYMQA AFQSPWVLGA FAFVFVLLAL SMFDFYELQM PSGIQTRLAG MGRGGHLFST FVMGVLSALI IGPCVAAPLA GGLLFISQTG DVFLGGLSLF ALSLGMGVPL LIIGTSAGHF LPRVGAWMNA VKAVFGVVLL GVAIWLLTRV LPGPVSLALW AALAVISAIY LGALDAIPAG ASGWRRFWKG LGVLMLVYGL VMGVGALGGA SDPLQPLTGY TAAVPPENRA EALHFTTVKT PEALQSALVQ ARGRPVLVDY WASWCVECLR MDKVTFADPQ VVAALRKRLL IRVDVTQDDA ASRALLKRYN LVGPPAFIAV AADGRTTAQQ EGYLGPEAFM GWLHQS
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