| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0469 |
|---|
| Symbol | pcm-2 |
|---|
| ID | 7135784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 409730 |
|---|
| End bp | 410455 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643528880 |
|---|
| Product | protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_002424965 |
|---|
| Protein GI | 218665372 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTT CGTTGCTAGC CCTGAGTCCT GAAGTCGGCA TGATTTCCCC GCGCACGCGG
GGAAGAATGG TGCTCCGTCT GCGCGCGGAA GGCATCCGTG ATGAGCGGGT GCTGGACGCG
ATGAACCGGG TTCCGCGTCA TCGCTTTGTC GCCCAAGCGC TGGCGGGGCG GGCCTATGAG
CCGGTATCGC TGCCCATCGG TTACGGACAG ACCATCTCCC AGCCCTGGAT GGTGGCGCGG
ATGATGGAAG CGATTCTGGA GGAGCGGGAG GTGCCCAGGC GGGTCCTGGA GATCGGTACA
GGGTCCGCTT ACCAGACCGC CGTGCTGGCG GAGCTAGGGG CGGAGGTCTT CAGTATCGAG
CGTATCGGCC CGCTGCAGGA AAGGGCGACC GCGTTGCTGG GCAGGCTGGG CTATCGCCAG
GTGCACCTGC AGCACGGCGA TGGCAGCGGC GGCTGGCCGG AAAAAGCCCC CTTTGACGCA
ATGGTCATTA CCGCTGCCGT GCCCTGCGCA CTGGCGCCCC TTTACCGCCA GTTGTGCGCC
GGAGGCAGTC TGGTAATGCC GGTGGAGGAG GGGGGGAGGC AGCATTTGCA GGTCAGTCAT
TGGGATGGCA GCACTGCGCG AGTGATTGCC CTGGGCAGTT GCCATTTTGT CCCCTTGCTA
GCGGGTACCG TTTCTGTGGC CTCAGGAGAA TGTGCGGATG ATAAACGCGA TTGGAGACGA
GGATGA
|
|---|
| Protein sequence | MAASLLALSP EVGMISPRTR GRMVLRLRAE GIRDERVLDA MNRVPRHRFV AQALAGRAYE
PVSLPIGYGQ TISQPWMVAR MMEAILEERE VPRRVLEIGT GSAYQTAVLA ELGAEVFSIE
RIGPLQERAT ALLGRLGYRQ VHLQHGDGSG GWPEKAPFDA MVITAAVPCA LAPLYRQLCA
GGSLVMPVEE GGRQHLQVSH WDGSTARVIA LGSCHFVPLL AGTVSVASGE CADDKRDWRR
G
|
|---|
| |