| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0407 |
|---|
| Symbol | |
|---|
| ID | 7135517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 355467 |
|---|
| End bp | 356693 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643528818 |
|---|
| Product | aspartate kinase, monofunctional class |
|---|
| Protein accession | YP_002424903 |
|---|
| Protein GI | 218666311 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTCA TCGTACAGAA ATTCGGCGGT ACTTCCGTGG GCAGTGTGGA ACGCATCCGG
GCCGTCGCGG AACGGGTCGC GGCCAGTCAT CGCGCCGGTC ACCAAGTGGT GGTGGTGGTT
TCCGCCATGT CGGGCGAGAC GGATCGCCTC CTGCAACTGG CGCGCGCCCT GGCCGATGCC
CCGGCGGAAC GCGAACTGGA CACCCTGCTC AGCACCGGCG AGCAGGTGAC CATTGCCCTG
CTGAGCATGG CGCTGGAGGG TATCGGTCAA CCCGCCATTT CGTTCACCGG CGGGCAGGTC
GCCATCCTGA CCGATTCGGC CCATAACCGG GCGCGCATCG AGCACATCGA CGATCACAAG
ATCCGCGCGG CACTGGATGC CGGCAAGATT GTGGTCGTGG CGGGTTTCCA GGGGGTCGAT
CCCCATGGCA ATATCACCAC CCTGGGTCGC GGCGGTTCCG ATACCACCGC CGTGGCCCTG
GCGGCCGCCC TGCATGCCGA TGAATGCGAC ATCTTCACCG ATGTGGACGG CATTTACACC
ACCGACCCGC GGGTGGAATC CCGGGCGCGC CGTCTGGATC GCATCACCTT TGAAGAAATG
CTGGAAATGG CCAGCCTCGG TGCCAAGGTC CTGCAAACCC GCTCCGTCGA ATTCGCCATG
AAGTACCATG TTCCCGTGCG GGTCTTGTCG TCTTTTCAGG ATGGCCCCGG CACTCTGGTC
ACCAATGAGG AAAATTCTGT GGAAGCTCCC CGCGTCTCCG GCATCGCCTT CTCCCGCAAT
GAAGCCAAGA TCACCGTGGT CGGCGTGCCC GACCATCCGG GTATCGCCTC CGCCATTCTG
GGTCCGATTT CCGCGGCCAA TATCAATGTG GACGTGATTC TCCAGAACGT CTCGGAGGCG
GGCAAGACCG ACTTCACCTT CACGGTGGAC CGCAATGATT TCGCCAAGTC CCGCGATATT
CTCCAGGGCG TGGCGCAGGT GCTCGGCGCC GAGGACGTGC GGGGCGACAC CCATATCGTC
AAGGTTTCCG TGGTAGGCGT CGGGATGCGC TCCCATGCCG GCATCGCCGC CACCATGTTT
GAAACCCTGG CGCGGGAAAA CATCAACATC CAGATGATTT CCACCTCCGA GATCAAGATT
TCCGTCGTCA TCGAAGAAAA ATATCTGGAA CTGGCGGTGC GGGCGCTGCA CGCGGCTTTC
GCCCTGGACG GGGAGGCGCC AGCCTGA
|
|---|
| Protein sequence | MALIVQKFGG TSVGSVERIR AVAERVAASH RAGHQVVVVV SAMSGETDRL LQLARALADA
PAERELDTLL STGEQVTIAL LSMALEGIGQ PAISFTGGQV AILTDSAHNR ARIEHIDDHK
IRAALDAGKI VVVAGFQGVD PHGNITTLGR GGSDTTAVAL AAALHADECD IFTDVDGIYT
TDPRVESRAR RLDRITFEEM LEMASLGAKV LQTRSVEFAM KYHVPVRVLS SFQDGPGTLV
TNEENSVEAP RVSGIAFSRN EAKITVVGVP DHPGIASAIL GPISAANINV DVILQNVSEA
GKTDFTFTVD RNDFAKSRDI LQGVAQVLGA EDVRGDTHIV KVSVVGVGMR SHAGIAATMF
ETLARENINI QMISTSEIKI SVVIEEKYLE LAVRALHAAF ALDGEAPA
|
|---|
| |