| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0397 |
|---|
| Symbol | |
|---|
| ID | 7134376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 348066 |
|---|
| End bp | 348818 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643528808 |
|---|
| Product | hydroxyacylglutathione hydrolase, putative |
|---|
| Protein accession | YP_002424893 |
|---|
| Protein GI | 218667304 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTTC ATTTTATTCC TGCCTTTACG GATAACTACA TCTACGTCGC CGAAACGCCC
AAAGGGGCGT GGATTATCGA CCCCGGTTGC GCGGAACCCG TCCTTGACTG GTGCGCGGAA
CATACGCTCC GCCCGAGCGC CATTCTCTGT ACCCACCATC ATGCCGACCA CACCGGAGGC
GTGGAAGCGC TGGCGCAGTA TTTCGGTATT CCCGTCTACG GCGCGAACCG GCGCATTCCG
GGACTGACCC ATGCCGTGGC CGAGGGTCGC CTGACGCTGG ATGCGGAGAC GCTCACGGTG
CTGGAGGTAC CCGGCCATAC CCGCGATCAT ATCGCGTATT GGTGGGAAAA CGTCCTTTTC
TGCGGAGACA CCCTCTTCGC CGCAGGCTGC GGGCGCCTCT TCGAGGGTAC CGCAGCGCAG
ATGTTTCACA GTCTGCAACG TCTCGCGGCG CTGCCCGATC ACACCGCCGT CTACTGCGCC
CATGAATACA CCCTCACGAA TCTGCGCTTC GCGGCCCAGG CCGACCCGGA CAATCCGGTC
ATAGTGCAGC GCCAGAAGGA AGCCATCGCA CAGCGCGCGC GCAACGAACC CACCTTACCC
TCCGACATGG CCCTGGAACG CGCCAGCAAC CCTTTTCTGC GGTGCCGCGA GCCCGCTCTG
ATCCGCAGCG CCAACGCCTT CGATCCCGCT ACGGGGGACG ACCCCGTCCG TGTCTTCAGC
GCCCTGCGCC GCTGGAAAGA CCACTTTTCC TGA
|
|---|
| Protein sequence | MPVHFIPAFT DNYIYVAETP KGAWIIDPGC AEPVLDWCAE HTLRPSAILC THHHADHTGG
VEALAQYFGI PVYGANRRIP GLTHAVAEGR LTLDAETLTV LEVPGHTRDH IAYWWENVLF
CGDTLFAAGC GRLFEGTAAQ MFHSLQRLAA LPDHTAVYCA HEYTLTNLRF AAQADPDNPV
IVQRQKEAIA QRARNEPTLP SDMALERASN PFLRCREPAL IRSANAFDPA TGDDPVRVFS
ALRRWKDHFS
|
|---|
| |