| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0395 |
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| Symbol | pnp |
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| ID | 7136855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 344662 |
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| End bp | 346734 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643528806 |
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| Product | polyribonucleotide nucleotidyltransferase |
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| Protein accession | YP_002424891 |
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| Protein GI | 218665115 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGGA AAGAAGTAGA TTTTGGCGGC CGCCGCCTGC AACTGGAGAC GGGCCGCATG
GCGCGTCAGG CGGACGGTGC GGTGCTGGTC TCCAGCGGAG ACACGGTCGT TCTGGTGACG
GCAGTGGGCC GCCGGGAGAT GAAGCCGGGC CAGGATTTCT TTCCGCTGAC GGTCAATTAT
CAGGAGAAGG CCTACGCGGC GGGCAAAATT CCCGGTGGTT TCTTCAAGCG TGAAGGGCGG
CCCACGGAAA AGGAGACGCT GACGTCACGC CTGATCGATC GTCCTATCCG GCCGCTTTTC
CCCAAGGGCT TCATGAACGA AGTGCAGGTC ATCGCTACGG TGGTGTCGGT GGATCGGGAT
AACGATCCCG ATATTCTGGC ACTGGTGGGT GCCTCGGCGG CGCTGGCGGT TTCCGGTATT
CCGTTCAATG GCCCGATTGG CGCGGCCCGG GTGGCTTACA TCGACGGGAA ATATGTGCTG
AATCCCAGTT ACGCGCAACT GACCACTTCG CAACTGGATC TCGTGGTGGC GGGAACCCGG
CAGGCCGTAC TCATGGTCGA GTCCGAGGCG CAGCAGTTGT CCGAAGAGAT CATGCTGGAA
GCGGTGATGT TCGGTCACGC GCAGTTCCAG CCCGTCATCG AAACCATCGA AGCGCTGGCG
CGGGAGGCCG GCAAACCGCG CTGGGAGTGG GTGGCGCCGG TGGCCGATGA AGCACTGGGT
GTGCAGGTGC GCGAGAAAGC CACACCGCTT CTGCAGGAGG CCTATGCGCT GACGGAGAAG
CAGGCGCGCA GCAAGCGGCT GGAAGATGTG CAGCAGGCCA TGGCGGTCGA GTTTGGCAGT
GACGATGCGG GACGCGGAGA CATGGTTCGC GGACTGTTGA AAAAAATTGA AACCGGCATC
GTGCGAGGAC GTATTCTGGA TGGCGCGCCC CGCATCGATG GCCGGGACAG CAAGACGGTG
CGGCCCATCA CCATCGAGGC GGGTGTGTTG CCGCGGACCC ATGGTTCGGC GCTCTTCACC
CGGGGGGAAA CCCAGGCCTT GGTGGTGGCG ACTTTGGGTA CCAAGGGCGA CGAGCAGATC
ATCGACGCCC TGCAGGGCGA AAGCCGTGAC CGCTTTATGC TGCATTACAA CTTCCCGCCC
TTCTCTACCG GTGAAACGGG TATGGTGGGT TCGCCCAAGC GCCGGGAGAT CGGGCACGGG
CGCCTGGCGA AGCGGGCGAT AGCGGCGGTC CTGCCGACCG ACAGCGAATT CCCGTACAGC
TTACGGGTTG TTTCTGAGGT ACTGGAGTCC AACGGCTCTT CCAGTATGGC GACGGTCTGT
GGCGCCTCCT TGGCGCTGAT GGACGCGGGC GTACCCCTCA AGGCGCCGGT GGCGGGCGTG
GCCATGGGCC TCATCAAGGA AGGAGCGCGT TTTGCCGTCC TCACCGATAT CCTGGGCGAT
GAAGATCATC TGGGCGATAT GGATTTCAAG GTGGCGGGCA CGGAACAAGG GGTGACCGCC
CTGCAGATGG ATATCAAGAT CGACGGGATT ACCCGGGAAA TCATGGCGCA GGCGCTCCAG
CAGGCGCTGG CGGGACGACT GCATATCCTC GGCCTGATGA ATGGCGTGCT GTCCAGGGGC
CGTGGCGAGT TGTCCGACTA CGCACCGCGC ATCATCACCA TCCAGATCAA TCCGGATCGC
ATCCGCGACG TCATCGGGCC GGGCGGTAAA GTCATCCGCG CCCTGACCGA AGAAACCGGC
GCGACCATCG ATATCCAGGA CAACGGCACG GTAACCATCG CCTCGGTGGA CGGTGAAGCC
GGCGCCGCCG CGAAGCGACG TATCGAGTTG CTGACGGCGG ATGTGCAAGT CGATACCATT
TACGACGGAA AAGTGGCCAA GATCATGGAT TTCGGCGCCT TTGTGACGAT TCTGCCGGGG
CGCGACGGTC TGCTGCACAT TTCCCAGATC AGCAACGAAC GGGTCAGCGA TGTCCACGAC
CATCTCAAGG AAGGACAGGC GGTGCGTGTC AAGGTTCTGG AAGTGGATCG CCAGGGCAAG
ATCAAGCTGA GCATGAAGGA CATCCCGCAA TAA
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| Protein sequence | MIRKEVDFGG RRLQLETGRM ARQADGAVLV SSGDTVVLVT AVGRREMKPG QDFFPLTVNY
QEKAYAAGKI PGGFFKREGR PTEKETLTSR LIDRPIRPLF PKGFMNEVQV IATVVSVDRD
NDPDILALVG ASAALAVSGI PFNGPIGAAR VAYIDGKYVL NPSYAQLTTS QLDLVVAGTR
QAVLMVESEA QQLSEEIMLE AVMFGHAQFQ PVIETIEALA REAGKPRWEW VAPVADEALG
VQVREKATPL LQEAYALTEK QARSKRLEDV QQAMAVEFGS DDAGRGDMVR GLLKKIETGI
VRGRILDGAP RIDGRDSKTV RPITIEAGVL PRTHGSALFT RGETQALVVA TLGTKGDEQI
IDALQGESRD RFMLHYNFPP FSTGETGMVG SPKRREIGHG RLAKRAIAAV LPTDSEFPYS
LRVVSEVLES NGSSSMATVC GASLALMDAG VPLKAPVAGV AMGLIKEGAR FAVLTDILGD
EDHLGDMDFK VAGTEQGVTA LQMDIKIDGI TREIMAQALQ QALAGRLHIL GLMNGVLSRG
RGELSDYAPR IITIQINPDR IRDVIGPGGK VIRALTEETG ATIDIQDNGT VTIASVDGEA
GAAAKRRIEL LTADVQVDTI YDGKVAKIMD FGAFVTILPG RDGLLHISQI SNERVSDVHD
HLKEGQAVRV KVLEVDRQGK IKLSMKDIPQ
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