| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0353 |
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| Symbol | rpsD |
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| ID | 7136446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 304606 |
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| End bp | 305232 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643528765 |
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| Product | ribosomal protein S4 |
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| Protein accession | YP_002424856 |
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| Protein GI | 218667358 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.152733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTAAAT ATACGGGTCC GAGTTGTCGT TTGTGTCGGC GCGAAGGCGG AAAGTTGTTT
CTCAAGGGTG AGAAGTGCTT TTCTGATAAA TGTCCAGTGA GTATTCGGGC CTACGCCCCT
GGGCAGCATG GCCAGCGGCG GGGACGTGTC AGCGAGTATG GCGGGCAATT GCGTGAGAAG
CAGAAAATCC GGCGCATTTA CGGCGTGTTG GAGGGGCAGT TTCGGCGATA TTTCCAGCGG
GCGAGTCAGG CACGCGGTGT CACCGGCGAG TTGCTGCTTC GGTTCCTCGA ACTGCGTCTC
GACAACGTTG CCTATCGCTT GGGTTTCGGC GCATCTCGTG CGGAGGCGCG CCAGGTCGTT
CGTCATGGCC ATATTCTGGT TAATGGACGA CGTGTGGATA TTCCGTCTTA CCAGGTACGT
GCCGGGGATG TTGTGAGCGT TGCTGAGGCT GCCCGGACGC ATATCCGTAT TGCTGCATCG
GTTGAAGCCA CAGCAGGTCG TGGTTTCCCG GAATGGGTGA GCATGGACAC TACCGAACTT
AAGGCGACCA TCAAAGCCGT GCCGGTGCGA GAAGATATGG CCCCGGATTT GAACGAACAG
GTCGTCGTGG AGTTGTACTC TAAGTAA
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| Protein sequence | MAKYTGPSCR LCRREGGKLF LKGEKCFSDK CPVSIRAYAP GQHGQRRGRV SEYGGQLREK
QKIRRIYGVL EGQFRRYFQR ASQARGVTGE LLLRFLELRL DNVAYRLGFG ASRAEARQVV
RHGHILVNGR RVDIPSYQVR AGDVVSVAEA ARTHIRIAAS VEATAGRGFP EWVSMDTTEL
KATIKAVPVR EDMAPDLNEQ VVVELYSK
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