| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0347 |
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| Symbol | secY |
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| ID | 7134569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 301421 |
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| End bp | 302752 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643528759 |
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| Product | preprotein translocase, SecY subunit |
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| Protein accession | YP_002424850 |
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| Protein GI | 218667727 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.742267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGGT TACGTAGCAT TGGAGGTGCC GCACAGGGTG CCGGTAAGAT CAATGAGTTA
CGTAACCGTA TCCTGTTTTT GCTTGGCGCG CTTCTGGTTT TTCGGGTGGG GGCGCATATC
CCCGTTCCCG GTATCGACCC TGCGGCTATG GCGACGTTTT TTAATCAGCA ACGGGGAACC
ATTCTTGGCA TGTTCAACAT GTTCTCCGGC GGGGCACTTT CCCGGCTGAC GGTTTTTGCG
TTAGGGATCA TGCCGTATAT CAGCGCATCC ATTATTTTTC AGTTGGCCGG GTCAGTTTTT
CCGAAACTTG AGGAACTAAA AAAGGAAGGC GAGGCCGGGC GTCGGAAAAT AACAGAGTAT
ACGCGTTATG CGACGGTCAT ATTGGCGTTG ATGCAAGGTC TGGGAATCGC CATCGCGATT
GAGAAGATGC ATGCCGGCAC TGTTCCGGTT GTTATTAGCC CAGGCCCGTT ATTCTTGTTT
ACCACAACCA TTTCTTTGGC TTGTGGTACG GTTTTTTTGA TGTGGATCGG GGAGCAGATC
ACCGAGCGTG GGATCGGCAA CGGCATTTCC ATGATTATCT TCGCCGGAAT TGTTGCCGGA
CTGCCAGACG CAATAGGGAC GACCTTTGAA CTGATGAAAA CGGGTCAGTT TCAGCCACTA
TTTGTTGTGG CGCTCTTTGT GCTGGCGCTT GCGGTGACGG GATTCGTGGT GTTTATGGAA
AGTGCGCAGA GACGTATTCC CATTCAGTAT GCCAAACGGC AGGTCGGTCG CAAAGTATAC
GGCGGGCAGA GCACCCACAT GCCGCTCAAG GTGAATATGT CCGGGGTGAT TCCACCGATA
TTCGCATCCA GCATAATATT ATTGCCCGCG ACCCTGTCAG GTTGGTTTGC GAATGTGCCA
GGTATGGAGT GGTTGGCGCG CTTCGGTCAG GCGTTGAGTC CGGGCTCTGC CCTTTACGTT
GTGGTGTTTA CAACGGCGAT CGTATTTTTT GCATTTTTTT ACACGGCCAT GGTCTTTAAT
CCTCGGGAAA CGGCGGATAA CCTGAAAAAG TCCGGAGCTT TCGTACCAGG TATCCGACCA
GGTGAGCATA CGGCTAAGTA CATGGATCGT ATCCTCACCC GGCTTACGCT CTGGGGCGCC
ATATACCTGA CCCTGGTTTG TTTGCTGCCA GAATTTCTCA TTGTGCAGTA CAATGTCCCA
TTCTATTTCG GCGGTACGAG TCTGCTGATC GTGGTCGTCG TGATGATGGA CCTGATGGGC
CAGATTCAGA GCCATTTGCT GACGCACCAG TATGAAGGGT TGATTCGCAA GAACCCTCTT
GGCGGGCGGT GA
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| Protein sequence | MAGLRSIGGA AQGAGKINEL RNRILFLLGA LLVFRVGAHI PVPGIDPAAM ATFFNQQRGT
ILGMFNMFSG GALSRLTVFA LGIMPYISAS IIFQLAGSVF PKLEELKKEG EAGRRKITEY
TRYATVILAL MQGLGIAIAI EKMHAGTVPV VISPGPLFLF TTTISLACGT VFLMWIGEQI
TERGIGNGIS MIIFAGIVAG LPDAIGTTFE LMKTGQFQPL FVVALFVLAL AVTGFVVFME
SAQRRIPIQY AKRQVGRKVY GGQSTHMPLK VNMSGVIPPI FASSIILLPA TLSGWFANVP
GMEWLARFGQ ALSPGSALYV VVFTTAIVFF AFFYTAMVFN PRETADNLKK SGAFVPGIRP
GEHTAKYMDR ILTRLTLWGA IYLTLVCLLP EFLIVQYNVP FYFGGTSLLI VVVVMMDLMG
QIQSHLLTHQ YEGLIRKNPL GGR
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