Gene AFE_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0334 
SymbolrplP 
ID7136381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp296618 
End bp297034 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content55% 
IMG OID643528746 
Product50S ribosomal protein L16 
Protein accessionYP_002424837 
Protein GI218666486 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0197] Ribosomal protein L16/L10E 
TIGRFAM ID[TIGR01164] ribosomal protein L16, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0307948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAGC CAAAACGTAC AAAATTTCGT AAACAACACA AAGGGCGTAA CCGAGGTGTC 
GCTACGCGCG GAAGCAAAGT GAGCTTTGGC GAGTTCGGTC TCAAGGCCGT TGGCCGTGGC
CGTATTACTG CGCGTCAGCT TGAAGCCGCA CGGCGCGCCA TCAGTCGTCA TGTGAAACGG
GGCGGACGCA TCTGGATACG TATTTTTCCG GACAAACCGA TCAGTAAAAA GCCTGCCGAG
GTGCGTATGG GCAAGGGTAA AGGCAACCCG GAATATTGGG TGGCACTGAT TCAGCCCGGC
AAGGTGCTTT ATGAAATGGA AGGTGTTACG GAAGAGGTTG CGCGTGAAGC ATTCGCGCTG
GGTGCTGCCA AGCTTCCGGT ACAGACGGCA TTTGTAAGTA GACGGGTGAT GGGATGA
 
Protein sequence
MLQPKRTKFR KQHKGRNRGV ATRGSKVSFG EFGLKAVGRG RITARQLEAA RRAISRHVKR 
GGRIWIRIFP DKPISKKPAE VRMGKGKGNP EYWVALIQPG KVLYEMEGVT EEVAREAFAL
GAAKLPVQTA FVSRRVMG