| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0333 |
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| Symbol | rpsC |
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| ID | 7135025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 295919 |
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| End bp | 296605 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643528745 |
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| Product | ribosomal protein S3 |
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| Protein accession | YP_002424836 |
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| Protein GI | 218667516 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.226722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCAGAGGT TTACTGAGGA ACCTATGGGA CAAAAAACCA ATCCAATCGG ACTGCGTCTG
GGAATCATTA AGAATTGGAA TTCCCGGTGG TATGGCAAAA GCGACTTCCA GGAGAAGCTG
CTTGAAGATA TCAAGGTCCG GCAGTTTATT CGGGAGCGGC TTGCAGGTGG GGCGGTTTCT
GACATTATCA TTGAGCGCCC AGCGCGTAGT GCGCGCATTA CCGTACATAC CGCCCGACCG
GGTATTGTGA TCGGTAAAAA GGGCGAAGAT ATTGAAAAGC TTCGGCATGA CGTACAAAAG
CGCATGGGGG TTCCCGTGCA TATCAATGTG GAGGAAATCC GCAAGCCTGA GCTGGACGCG
CAGTTGGTGG CAGAAAGCGT AGCGCAGCAA CTCGTCCGTC GTATCATGTT CCGGCGGGCC
ATGAAGCGCG CTGTTACCAA TGCCATGCGT TTCGGTGCCT TAGGCATGCG CATTAACTGT
GCCGGTCGTT TGGGTGGGGC CGAAATTGCC CGCACTGAAT GGTATCGAGA GGGTCGCGTT
CCGCTGCACA CGTTGCGCGC TGATATTGAC TACGGTTTCG CTGAGGCCAA CACCACCTAC
GGAATAATTG GGGTGAAGGT ATGGATTTTC AAAGGTGAAA TTCTGGAGTG GAGCACGGCA
CAAACGGCCG CTGCCCGCCA GAAGTGA
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| Protein sequence | MQRFTEEPMG QKTNPIGLRL GIIKNWNSRW YGKSDFQEKL LEDIKVRQFI RERLAGGAVS
DIIIERPARS ARITVHTARP GIVIGKKGED IEKLRHDVQK RMGVPVHINV EEIRKPELDA
QLVAESVAQQ LVRRIMFRRA MKRAVTNAMR FGALGMRINC AGRLGGAEIA RTEWYREGRV
PLHTLRADID YGFAEANTTY GIIGVKVWIF KGEILEWSTA QTAAARQK
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