Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0330 |
Symbol | rplB |
ID | 7136550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 294470 |
End bp | 295294 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643528742 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_002424833 |
Protein GI | 218667921 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.927956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTGA TTAAAACCAA ACCGACCTCT GCAGGGCGGC GTTTCGTGGT AAAAACCATC GATACACGTC TGCATAAAGG GAACCCGCAT TCCGCCCTGG TGGAGGTGCA ATCTCACAGT GGCGGTCGCA ACAATCTTGG TCGGGTTACT CGGCGGCACC AGGGAGGCGG ACACAAGTCC CATTATCGGC TGGTGGATTT TAAGCGTAAT AAGCTAGACA TACCTGGCAA GGTAGAACGC TTGGAATACG ATCCCAATCG CTCCGCCCAT ATTGCGTTGA TTTGTTATGT CGACGGTGAG CGTCGCTATA TCCTCGCGGC AAAAGGCATG TCTGTCGGTG ATCCGGTGCT TTCTGCTGAG CAGACGCCCA TAAAGCCCGG TAATTGTATG CCACTTCGCG GTATCCCGGT GGGTTCAGTG GTTCATAATG TTGAGATGCG CCCGGGCAAG GGCGGACAGA TTGCCAGATC CGCTGGCGCA TCGGTTCAGC TCATGGCCCG TGAGGGCGAT TACGCCCAAC TGCGCTTGCG CTCTGGTGAA GTCCGCAGAA TTCATGTATC CTGCCGCGCT ACTATAGGTG AGGTAGGCAA TGAAGAACAC GGATCTCGTC AGTTGGGAAA GGCGGGAGCA ACGCGCTGGC GGGGTGTGCG GCCAACAGTT CGTGGTGTGG CGATGAACCC GGTTGACCAC CCACATGGTG GTGGCGAAGG CCGTACTTCC GGTGGTCGCC ACCCGGTATC GCCGTGGGGC CAACCGACCA AGGGTTACCG TACTCGTAGA AACAAGCGTA CGAGCAATAT GATTGTGCGT CGTCGTTCGC GTTAG
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Protein sequence | MALIKTKPTS AGRRFVVKTI DTRLHKGNPH SALVEVQSHS GGRNNLGRVT RRHQGGGHKS HYRLVDFKRN KLDIPGKVER LEYDPNRSAH IALICYVDGE RRYILAAKGM SVGDPVLSAE QTPIKPGNCM PLRGIPVGSV VHNVEMRPGK GGQIARSAGA SVQLMAREGD YAQLRLRSGE VRRIHVSCRA TIGEVGNEEH GSRQLGKAGA TRWRGVRPTV RGVAMNPVDH PHGGGEGRTS GGRHPVSPWG QPTKGYRTRR NKRTSNMIVR RRSR
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