Gene AFE_0301 details

Gene Information

• Locus tag: AFE_0301
• Symbol: nusB
• ID: 7136226
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 270353
• End bp: 270796
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643528713
• Product: transcription antitermination factor NusB
• Protein accession: YP_002424808
• Protein GI: 218667110
• COG category: [K] Transcription
• COG ID: [COG0781] Transcription termination factor
• TIGRFAM ID: [TIGR01951] transcription antitermination factor NusB

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.605543
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATCA GTCGCCGTCG TCTGGCGCGT CAAGCTGCGG TTCAGGCGCT CTACCAGTGG 
CAGATGAATC CGGGCCATTG TGCGGAGATC GAGTTGCAAT TTACCTCCGA TCCGGAGCGC 
CTGCAGGGCG CCGATGTCGC TTTCTTTAAA AGCCTCTGGC AAGGGGTCTG TGCCGCAATC 
TCCGAACTGG ACCCTGCCAT CGCCGAGGAA GTTCAGGACC GTCGCTGGGC CGATGAGGTC 
AGCGAGGTCG AACGGGCGAT CCTGCGTCTG GCGGCCTGCG AATTGCGGGA CTATCCGCAA 
ACGCCATACC GGGTGATCAT CAATGAAGCC ATAGAACTGG ACAAAGACTT TGGTGGTGAG 
CAAGGCCATC GCTTCGTCAA CGCCGTCCTG GATAAACTCG CGCAGAGGTG GCGGTCTGCG 
GAGATGTTGC AGGCCGGTCG CTGA 

 

Protein sequence

MKISRRRLAR QAAVQALYQW QMNPGHCAEI ELQFTSDPER LQGADVAFFK SLWQGVCAAI 
SELDPAIAEE VQDRRWADEV SEVERAILRL AACELRDYPQ TPYRVIINEA IELDKDFGGE 
QGHRFVNAVL DKLAQRWRSA EMLQAGR