Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0267 |
Symbol | sqr |
ID | 7135954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 241295 |
End bp | 242422 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643528679 |
Product | sulfide quinone reductase, putative |
Protein accession | YP_002424774 |
Protein GI | 218667259 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAG TGACCATTAT CGGCGCAGGC TTTGGTGGCT TGACGGCCGT CCGCCACCTG CGTCGCCGGA TGCCCGACGC GGAAATCACC GTCATCGCAC CCAGGGCGGA GTTCGTTTAC TACCCCAGCC TGATCTGGAT TCCCACCGGG CTGCGGCAAG GCGAGAATCT GCGGATTCCC CTGGACCGTT TCTTTCAGCG CCGACGAGTG CAGTTTCATC AGGGTCGCGT CACTGGCCTG CGCGATGGCG GCCGTACCGT CATCACCGAC CAGGGTGAAG TGCGGAACGA CGCGCTCATC ATTGCCAGCG GCGGTCGCGG TATTCGTAAG CTGCCGGGCA TCGAACACAG TTTCGCCATC TGCGACGGTA TCGATGCCGC CGAAAACATC CGAGACCGCT TGGCGCTGAT GGACAAAGGC ACCATTGCCT TCGGTTTCGC CGGCAATCCC CTGGAGCCGA CCGCCGTACG CGGTGGTCCG GTCTTTGAAC TGCTCTTTGG AATCGACACT TACCTTCGTC AGATCGATAA GCGCGGGCAA ATCGAATTGG TATTTTTCAA TCCGATGACC GAACCGGGTA ATCGACTGGG TCCGAAGGCG GTGGAAGGAC TGCTCGCGGA AATGCAGCGG CGCGATATTC GCACCCATCT TGGTCATAAA ATCAGTGGGT TCTCGGTAAA CAAAGTGATG ACCGAAGGCG GCGACATTGC CGCGGACCTG ATCCTGTTCA TGCCCGGCAT GACCGGCCCG GACTGGGCAG CCGACAGCGG TTTGCCCCTC TCTGCCGGTG GCTTTTTTCA GTCCGACCTG CACTGCACCG TCCCCGACCA TCCGGGCGTC TTTGTCATTG GTGACGGGGG GTCCTACGCG GGCAGCCCGG ACTGGCTACC CAAGCAGGGC CACATGGCGG ACCTGCAGGC CGGGACCGCC GTGCATAACC TGCTCCTGCA TCTGCAGGGG AAGGCGGCAG ACAATACCTT CCGCAGCGAG TTGATCTGCA TTGTCGACAC CTTGGACAGC GGCATCATGG TCTATCGCAG CCCCAATCAT GCCAGCATCC TGCCAAACTC GCTCTGGCAT GCGGCCAAGG TCGCCTTTGA GTGGCGTTAT CTGTTGCATT ACCGCTGA
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Protein sequence | MTQVTIIGAG FGGLTAVRHL RRRMPDAEIT VIAPRAEFVY YPSLIWIPTG LRQGENLRIP LDRFFQRRRV QFHQGRVTGL RDGGRTVITD QGEVRNDALI IASGGRGIRK LPGIEHSFAI CDGIDAAENI RDRLALMDKG TIAFGFAGNP LEPTAVRGGP VFELLFGIDT YLRQIDKRGQ IELVFFNPMT EPGNRLGPKA VEGLLAEMQR RDIRTHLGHK ISGFSVNKVM TEGGDIAADL ILFMPGMTGP DWAADSGLPL SAGGFFQSDL HCTVPDHPGV FVIGDGGSYA GSPDWLPKQG HMADLQAGTA VHNLLLHLQG KAADNTFRSE LICIVDTLDS GIMVYRSPNH ASILPNSLWH AAKVAFEWRY LLHYR
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