Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0257 |
Symbol | |
ID | 7136460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 232838 |
End bp | 233851 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643528669 |
Product | secretion protein, HlyD family |
Protein accession | YP_002424764 |
Protein GI | 218668092 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.787376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTGGC TCAAACGCCT TTTGGTTCTG GTCATCATCG TCGTGGTTGC CTTTGGCGCC TATGCATACT TCCAGATTTC TGATTACTAT CCCAACACCG ACGATGCCTA TCTGCATGCC CATGTCGTGA ACATCGCACC GCGGGTTACA GGACATATTG TCGCTATTTA TGTGCATGAT AATCAGGTGG TGCAGGCTGG ACAGCCCCTG GTCGAGGTGG ATCCGCGGGC CTACGTCTAC GACGTGCAGA AAGCCGAGGC CGAACTGACC CAGGCGGAAC GGCAGACGGC CGCCATTCAG GCCAATATTG CCGGAGCGCG CGCCAATATC AGCGCCGACC AGGTCAATTA CCAGAATGCC CGGCACAACG CCCAACGCGC GGCGGCGCTG GCGGCGCAGA AATATCTGTC TGCGCAACAG GCGGATAACG AAATGACCGC GGCGAAAAGT GCCGGGGCGC GCCTGACCGC AGATCAGGCG GCCCTGGCGG AGACCCAGGC GCAGCAAGTC CTCAATGGTG CCCGCATCGC CGCCGCCAAG GCCGCCCTGC GCACAGCCCG GCTCTATCTG TCTGAAACCA CGCTCTACGC GCCCATCGCG GGGGTCGTCA GCAAAGTGGA TAAAATCCAT GTGGGCGACG TGGTCAATGT CAATCAGGAT CTGTTCCCCC TGATCGGCAA TGCGGAATAC TGGGTCGAGG CCAACTACAA GGAAACCGAT CTCAGCCGGG TACACCCGGG ACAGAGTGCG AAAATCACTG TGGACATGTA CCCCGACCAT CCCTTCAAGG GAAAGGTGGT GAGCCTGAGC GGCGGTGCCG GAAACGCCTT CTCCCTGCTC CCCCCGGAAA ATGCTACGGG TAACTGGGTA AAGGTGACAC AGCGGGTACC GGTGCGTGTG CTCATCACCA ATCCGGACTC CAGGTTCCCG CTACGGATCG GTACCAGCGC GTCGGTAACG GTGGATACGG GCGGAGCACC GGGCTGGGTC AAGGCGCTGC GGCCGATCTT CTGA
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Protein sequence | MRWLKRLLVL VIIVVVAFGA YAYFQISDYY PNTDDAYLHA HVVNIAPRVT GHIVAIYVHD NQVVQAGQPL VEVDPRAYVY DVQKAEAELT QAERQTAAIQ ANIAGARANI SADQVNYQNA RHNAQRAAAL AAQKYLSAQQ ADNEMTAAKS AGARLTADQA ALAETQAQQV LNGARIAAAK AALRTARLYL SETTLYAPIA GVVSKVDKIH VGDVVNVNQD LFPLIGNAEY WVEANYKETD LSRVHPGQSA KITVDMYPDH PFKGKVVSLS GGAGNAFSLL PPENATGNWV KVTQRVPVRV LITNPDSRFP LRIGTSASVT VDTGGAPGWV KALRPIF
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