Gene AFE_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0233 
Symbol 
ID7135811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp210412 
End bp211359 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content52% 
IMG OID643528645 
Productglycosyl transferase, group 2 family protein 
Protein accessionYP_002424740 
Protein GI218666971 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.885705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT GCGTTATTAT TGTTAACTAT AATGGCGTAT CAAAAACACT TGACGCAATT 
TCTTCCTGTC TTGCGGAGGG CGTGTTGGCG CAACATTGTA TCGTCATCGA TAATGGTAGC
GATGACGGGT CGGTGGAGGT GATTTCGCAA CGGTTTCCCG ACATCAAGAT ATTGGCGAAC
AGTTGTAATG CCGGCTTCGC CCGTGCGGTC AACCAGGGGT TGGCGGTCGC TGATCGTGAT
TTCGTCATGG TTCTGAATAA TGACGCGCAA CTATTATCGG GTACGCTGGA GGCTGTGACA
TGCTGTTTTC TGGCCTGGCC TCGAGCGGCC CTCGTGGGTG CCCGTCTGAT TGATCCGGTC
GGTCGTACAC AAAATGTCGT GGCGGCATTG CCGCGATTCT GGCACGAAAT ATTGCCAAGG
GCACTGCTCA AAAGAGTGGC ACCAAAATAC TTCGGTGGGC GTCTATCAGG GGAGCGTCAA
TCGGTAAATG TTCCCAGCCT GATCGGTGCA GCAATGACGG TACGCCGTTC TTTCTTGCCT
CAATTGGGCA TGTTGGACGA AGATTTCTTC TTTTATCTGG AAGAAACGGA ATGGTGCGCA
CGTGCCCATC GTCTTGGATT CGACGTGGTG TTTTGTCCAG ATGCCAGGGT AGAGCACGCC
CTTGGTGGCA CCGCCAGGAA ATTTCAGGTA GGGTCGCGCA TTGAATTTCA GCGCTCACGG
TTGCTCTATG CCCGTAAGGT GGAGGGCCGC ATTCCCTGGG TGGTTTTATC TTTGTGGATG
CCAGTAAAAG CGGCAATTGA CTTTCTTGCC AATGGAATAG CAATGGTGCT TACTCTCGGG
CTTCTTCCTC GTCAGCGGAA ACGTTGTTTG ACCTACGGAG GAATACTGAT GTGGCATCTT
CTGTTCCGGC CAGCACACTG GGGCCTGCCG GGGAAGTGCG GTAAATAA
 
Protein sequence
MKFCVIIVNY NGVSKTLDAI SSCLAEGVLA QHCIVIDNGS DDGSVEVISQ RFPDIKILAN 
SCNAGFARAV NQGLAVADRD FVMVLNNDAQ LLSGTLEAVT CCFLAWPRAA LVGARLIDPV
GRTQNVVAAL PRFWHEILPR ALLKRVAPKY FGGRLSGERQ SVNVPSLIGA AMTVRRSFLP
QLGMLDEDFF FYLEETEWCA RAHRLGFDVV FCPDARVEHA LGGTARKFQV GSRIEFQRSR
LLYARKVEGR IPWVVLSLWM PVKAAIDFLA NGIAMVLTLG LLPRQRKRCL TYGGILMWHL
LFRPAHWGLP GKCGK