Gene AFE_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0221 
SymbolsspA 
ID7136347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp197366 
End bp197986 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content58% 
IMG OID643528633 
Productstringent starvation protein A 
Protein accessionYP_002424728 
Protein GI218666650 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.43404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCC CCAGCAGCAA AAAAACCCTC ATGACGCTCT ACTCCAGCAA CGATTGTGTC 
TTCGCGCACC GTGTGCGTTT CGTGCTGGAA GAGAAGGCTA TGGAATACCA GATCATCGAC 
GTCGATCTCG GCAACCGGCC CGAAGACCTT GCGGAACTCA ATCCCTACAA CCAAGTGCCG 
ACCTTGGTGG ATCGCGATCT GGCCATTCAC GAATCGGTCC TGATCATGGA GTACCTTGAC 
GAGCGGTTCC CCCATCCGCC ACTGATTCCG GTAGACCCCA TATCCCGTGC CAAGGTGCGC 
CTGGGTCTCC TGCGTTTCGA CCGTGACTGG TTTGCACCGC TCTTTCAGCC CGGCTACGGT 
GCCGAGCAGG TCAAAACCGC CAAGGAACAG ATTCGCAGTA CCCTCGCCGG GCTGAACAGC 
ATCTTCAGCC AACAGCGTTA CCTCTTTGGT GACGACCTTT CGGTACTCGA CTGTGCTATC 
GCCCCACTCC TGTGGCGCAT GCCGGTACTG GACATCTCTC TACCCGCCGC AGCCCGTGCC 
ACCCAGAATT ATATGGATCG CATCTTCGGC ATGGAGAGCT TCAAACGCAG CCTGACGCCT 
GCCGAGAAGG CCATGCGCTG A
 
Protein sequence
MATPSSKKTL MTLYSSNDCV FAHRVRFVLE EKAMEYQIID VDLGNRPEDL AELNPYNQVP 
TLVDRDLAIH ESVLIMEYLD ERFPHPPLIP VDPISRAKVR LGLLRFDRDW FAPLFQPGYG 
AEQVKTAKEQ IRSTLAGLNS IFSQQRYLFG DDLSVLDCAI APLLWRMPVL DISLPAAARA 
TQNYMDRIFG MESFKRSLTP AEKAMR