Gene AFE_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0188 
Symbol 
ID7137132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp166771 
End bp167523 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID643528602 
Producthypothetical protein 
Protein accessionYP_002424697 
Protein GI218665572 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.477453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTTT ACGAACACCC GCTCCATGAA CGCGCCCGCC TGCTGCTGCG TCTGGAAAGC 
GTCTTTGCAC AACTACAGCA GGGGCCGGCC GATGCTGGCT GCCTGCGTAA CGCCCTGCGC
GCCTATAATG AACTGCTGGA TTTTTGCAGC CGCCCGGAGT TGCGCCTGGA TCTCATTCTG
GAGCTGGAGC GTCTGGCCCA GAGCCTTGCC ATCTGGTCGC AGAGTCCCGA GGCGGACGAA
GGCCCTTTGC GCGCCTGGCA GTTTCGCATA GACCTGCAAC TCAAAGCGCT GCGCGAGTAT
CGCGAACCCT TCGGGCAACT GTTGCGCCAC CAGGATATCA TCCAGCTTGC ACGGGGCAGG
ATGGGGGTGG CCGGAGGTCT CGCCGACTGT GATCTGCCGG TTCTGGCCTT CTGGAAATAT
CAGCCCCCCG AGCGTATCGC GGGACTCCTG CGGGGTTGGC GGGAGAGTCT GTCGATCTTG
CAGGATAGCA CCGATCTGAT CCTCGCCTTG CTGCGGGACT CCTGCTCGTG GTCCGGCGTG
GAAGCCCCGG AGGGGCGTTA TGGCGCGCTT CTGGACGCAC GCCATCCGCC TTCCCTGATC
TGCCTGGAGT TGTCGGATCG TGCGGATTAC TATCCCAAAA TCAGTGGGGG TATCCATCGT
TTTCACATCC AGTGGCTGCC ATGGTTGGAC CAGGGAACGG CGCGCGCGAT AGAATCCACC
ATAAAATTTC GCCTGGGACT CAGTGCCCTC TGA
 
Protein sequence
MAVYEHPLHE RARLLLRLES VFAQLQQGPA DAGCLRNALR AYNELLDFCS RPELRLDLIL 
ELERLAQSLA IWSQSPEADE GPLRAWQFRI DLQLKALREY REPFGQLLRH QDIIQLARGR
MGVAGGLADC DLPVLAFWKY QPPERIAGLL RGWRESLSIL QDSTDLILAL LRDSCSWSGV
EAPEGRYGAL LDARHPPSLI CLELSDRADY YPKISGGIHR FHIQWLPWLD QGTARAIEST
IKFRLGLSAL