Gene AFE_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0166 
Symbol 
ID7134905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp145352 
End bp145906 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content61% 
IMG OID643528580 
ProductHNH endonuclease domain protein 
Protein accessionYP_002424675 
Protein GI218666495 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCTCG TGCTGCGCCT TGACGTCGGT GGTCGTCCCA TGGCCTGGGA AACCTGGGAA 
GAAGCCGCGG CCCATTATGT CCGGGGTAAC GTTGCCTGGA CACTGGGGAG TCCTTTCTTT
ACCGCCCACG GCGGCATCTG CCGCCGCAGT GGTGTCCTCT CGCAACTCGA CATTCATCCG
GTCATCGCCG TCCGCGGTCG CCATCAGGGC AAGATTCGGC CTCCGGCCCT GTCCAATCAG
ACCTTGTTCC ATCGCGATCA TCATCTCTGC ATGTACTGTG GCAAACATTT CCCTCTCCGC
GAACTCACCC GTGACCACAT CATTCCCATC TCCCGCAAGG GCAGGGATAT CTGGACCAAC
GTGGTGACTG CCTGCCGCAG TTGCAACAGC CGCAAGGACA ATCGCACCCC CGAGGAGGCC
CATATGCCGC TGCTCGCGGT GCCTTTTACT CCGACCTGGG CCGAATATCT GCTGCTCAGT
AACCGGCGCA TTCTCGCCGA TCAGATGGAG TTCCTGATCG CCCAGGTGCC GGAAGGACGC
CATCGCGTTT TTTGA
 
Protein sequence
MHLVLRLDVG GRPMAWETWE EAAAHYVRGN VAWTLGSPFF TAHGGICRRS GVLSQLDIHP 
VIAVRGRHQG KIRPPALSNQ TLFHRDHHLC MYCGKHFPLR ELTRDHIIPI SRKGRDIWTN
VVTACRSCNS RKDNRTPEEA HMPLLAVPFT PTWAEYLLLS NRRILADQME FLIAQVPEGR
HRVF