| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0156 |
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| Symbol | speE |
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| ID | 7136730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 138424 |
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| End bp | 139374 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643528570 |
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| Product | spermidine synthase |
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| Protein accession | YP_002424665 |
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| Protein GI | 218666749 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.870744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCACA GCGGTAACGG GTGGACCGGA ATCAGCGGTC CACCCTTTTC TTTTGCCCGT
ATCTTCCGCA GAATTCCTGC GGACACCCCA CCATCCCCGT TGAGAGAGGC GGTTATGAGC
ACAGAACTGT GGTATACCGA GCGCTATGAA GAGCACGGCG CGGCATTGAG CCTGAAAATC
CGCGAAGTGC TGCATCGTGA GCAAAGCCCT TATCAAAATA TAGAAATCTT CGAGACCGAA
CAGTTCGGCA CCCTCATGAC CCTGGACGGT CTGGTCATGG TCACTGACCG CGACAATTTC
CTCTATCACG AAATGATGAG CCATCCGGCC CTCTTTACCC ACCCGGCACC GAAACGGGTG
CTGATCATCG GCGGCGGTGA CTGCGGCACC CTGCGCGAGG TGCTGCGCCA TCGGGAAGTG
GAAGAAGCCG TGCAGGTGGA ACTGGATGAG CGGGTTACCC GCGTCGCCGA GCGTTTTTTC
CCGGAACTCT GCGAGAACAA CCAGGATCCC CGAGCCCGTT TCCATTTTAC CGATGGAATT
ACCTGGATCA AAGAGGCGGA AGCGGGACGC TACGATGTGA TCATCATTGA CTCCACCGAC
CCGGTCGGAC CGGCGGCTGG ACTGTTCGCC ACGGACTTTT ACGCAGCCTG TCACCATGCG
CTGGCCGATC AGGGCGTGCT GGTCGCCCAG TCCGAGTCGC CGCTCCTGCA CGCCGATCTC
ATCCGCCAAT GCCAAAGTCG CATGACGGAA GCGGGCTTCG ACGCAGTGAA CAGCCTGTAT
TTCCCGCAGT TCTGTTATCC CTCCGGCTGG TGGAGCGCAA CATTGGGACG CAAAGGTCTC
GCCATGGATG CCTTCCGTAT CGATGCCGCC AGGGCCTTTA CTGGCACCCG TTACTACCAC
GCTGCCATGC AGCAGGCCGC CCAGGTCGCT CCGGCCTTTC TGCTGCCCTG A
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| Protein sequence | MTHSGNGWTG ISGPPFSFAR IFRRIPADTP PSPLREAVMS TELWYTERYE EHGAALSLKI
REVLHREQSP YQNIEIFETE QFGTLMTLDG LVMVTDRDNF LYHEMMSHPA LFTHPAPKRV
LIIGGGDCGT LREVLRHREV EEAVQVELDE RVTRVAERFF PELCENNQDP RARFHFTDGI
TWIKEAEAGR YDVIIIDSTD PVGPAAGLFA TDFYAACHHA LADQGVLVAQ SESPLLHADL
IRQCQSRMTE AGFDAVNSLY FPQFCYPSGW WSATLGRKGL AMDAFRIDAA RAFTGTRYYH
AAMQQAAQVA PAFLLP
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