Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0076 |
Symbol | |
ID | 7135556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 75356 |
End bp | 76855 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643528493 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_002424590 |
Protein GI | 218667791 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.160586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCC CCCACCCCCG TATCGCCCGC TCCACCCTCA TCAATCTGGT GGGCGCTGCC ATACCTGCCG CTCTGCTGTT AATCACTGTA CCCATCTATC TTCACCTCAT AGGTGAAGCC CGCTACGGCG TCCTTGCCAT AGTCTGGCTG CTGCTTGGCT ACTTTGGGGT ATTTGATTTT GGATTCGGGC GGGCAGTCGC CAACCGCATC GCCGCCCTCC ACGACGCTAC GGCCGAAGAG CGACAGGGTA TTTTTTGGAC CGGATTAGCG ATCAGTGCCG TTACCGGCCT CATTGGCGGA GCCATTCTCT ATCTGCTTGG GGATTGGCTG TTTGCTCATG TTTTCCACAT CTCCGGCTCT TTGCGAATCG AAGCGGAAAA TGCAATGCCG TGGTTGGCAC TTGCGTTGCC ACTAGCCATT ATTATCTCGC TGCTGGCAGG CGCCCTGGAA GGGCGACAAG CCTTTCTCGC GCTTAATGGA GCACAAATTT TTGGTACGGT GCTCTATCAG CTTTTCCCGT TAGTTGTAGC CTATGCGGGA TGGATAACGC TACCTTATTT GATATCGGCC GCCATTGTCG GACGGCTATT GAGCGTCCTA TTACTTTTCG CTCTTAGCTA TCGCCATGTA CCCCTGTCGC CACGCCCCCG CTTTGCCCTC CATCAGGTGA AATCCTTGCT GCACTACGGC GGCTGGATCA CGGTCACCGG GCTGGTCGGC CCCCTGTTGA CCGTTTTTGA CCGCTTCCTC ATTGGCGCCA AGGTGGGCAT GGTGGCAGTC ACCGCTTACA CTGTGCCTTA TAACCTTGTC ATGCGGCTCT CCATTCTTCC TGGCAGCCTA CAAACTGCAT TGTTCCCCAG ATTTGCCATG GTGGACCCCA CCGAGGCAAA GGTGCTGGCG GCGCGTGCCA TATTATCCAT AGGGGCTATC ATGACCCCGA TAGTGGTGAT AGGGTTGCTG CTCATCAAAC CCTTTCTGAT CCTTTGGGTG GGCGCAGCGC TGGCGGAAAA AACCGCCCCG GTCGGACAAA TACTACTCGT CGGGATATGG ATCAATACCC TGGCCATTAT TCCCTTTACC TATCTCCAAG GCAGAGGGCG CCCCGATTTG CCCGCCAAGT TCCATGTCCT GGAGCTTCTT CCCTACGTTG CTATCCTGTG GGTGCTTATC GACCGGCTTG GCATACCGGG CGCCGCTTGG GCCTGGGATC TGCGTGTCCT TGCGGATACC CTGCTCTTGT TCTGGGCGGC GCAGACTACC TCCGGCTTGA ACCGCACCAT GGCTGGTATC CTGCCCATTA CCGGGGCCTT CGTTATTGCC TTTGAAATGC CTTATGACTC TGCCCTGTAT GTGGGGATTT CGCTACTGTT GGCAGGTGCA AGCATTGGCT GGTCCATTGC CAGCATTCCT CAAGATCAAC GCACCACCCT CTCGCGTCGC CTTTTGGCGC GAACGCCTCC TGTCAACTCA ACGGTCTCGC AGGAAAAACA TGGATCATGA
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Protein sequence | MTAPHPRIAR STLINLVGAA IPAALLLITV PIYLHLIGEA RYGVLAIVWL LLGYFGVFDF GFGRAVANRI AALHDATAEE RQGIFWTGLA ISAVTGLIGG AILYLLGDWL FAHVFHISGS LRIEAENAMP WLALALPLAI IISLLAGALE GRQAFLALNG AQIFGTVLYQ LFPLVVAYAG WITLPYLISA AIVGRLLSVL LLFALSYRHV PLSPRPRFAL HQVKSLLHYG GWITVTGLVG PLLTVFDRFL IGAKVGMVAV TAYTVPYNLV MRLSILPGSL QTALFPRFAM VDPTEAKVLA ARAILSIGAI MTPIVVIGLL LIKPFLILWV GAALAEKTAP VGQILLVGIW INTLAIIPFT YLQGRGRPDL PAKFHVLELL PYVAILWVLI DRLGIPGAAW AWDLRVLADT LLLFWAAQTT SGLNRTMAGI LPITGAFVIA FEMPYDSALY VGISLLLAGA SIGWSIASIP QDQRTTLSRR LLARTPPVNS TVSQEKHGS
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