Gene AFE_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0076 
Symbol 
ID7135556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp75356 
End bp76855 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content56% 
IMG OID643528493 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_002424590 
Protein GI218667791 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.160586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCC CCCACCCCCG TATCGCCCGC TCCACCCTCA TCAATCTGGT GGGCGCTGCC 
ATACCTGCCG CTCTGCTGTT AATCACTGTA CCCATCTATC TTCACCTCAT AGGTGAAGCC
CGCTACGGCG TCCTTGCCAT AGTCTGGCTG CTGCTTGGCT ACTTTGGGGT ATTTGATTTT
GGATTCGGGC GGGCAGTCGC CAACCGCATC GCCGCCCTCC ACGACGCTAC GGCCGAAGAG
CGACAGGGTA TTTTTTGGAC CGGATTAGCG ATCAGTGCCG TTACCGGCCT CATTGGCGGA
GCCATTCTCT ATCTGCTTGG GGATTGGCTG TTTGCTCATG TTTTCCACAT CTCCGGCTCT
TTGCGAATCG AAGCGGAAAA TGCAATGCCG TGGTTGGCAC TTGCGTTGCC ACTAGCCATT
ATTATCTCGC TGCTGGCAGG CGCCCTGGAA GGGCGACAAG CCTTTCTCGC GCTTAATGGA
GCACAAATTT TTGGTACGGT GCTCTATCAG CTTTTCCCGT TAGTTGTAGC CTATGCGGGA
TGGATAACGC TACCTTATTT GATATCGGCC GCCATTGTCG GACGGCTATT GAGCGTCCTA
TTACTTTTCG CTCTTAGCTA TCGCCATGTA CCCCTGTCGC CACGCCCCCG CTTTGCCCTC
CATCAGGTGA AATCCTTGCT GCACTACGGC GGCTGGATCA CGGTCACCGG GCTGGTCGGC
CCCCTGTTGA CCGTTTTTGA CCGCTTCCTC ATTGGCGCCA AGGTGGGCAT GGTGGCAGTC
ACCGCTTACA CTGTGCCTTA TAACCTTGTC ATGCGGCTCT CCATTCTTCC TGGCAGCCTA
CAAACTGCAT TGTTCCCCAG ATTTGCCATG GTGGACCCCA CCGAGGCAAA GGTGCTGGCG
GCGCGTGCCA TATTATCCAT AGGGGCTATC ATGACCCCGA TAGTGGTGAT AGGGTTGCTG
CTCATCAAAC CCTTTCTGAT CCTTTGGGTG GGCGCAGCGC TGGCGGAAAA AACCGCCCCG
GTCGGACAAA TACTACTCGT CGGGATATGG ATCAATACCC TGGCCATTAT TCCCTTTACC
TATCTCCAAG GCAGAGGGCG CCCCGATTTG CCCGCCAAGT TCCATGTCCT GGAGCTTCTT
CCCTACGTTG CTATCCTGTG GGTGCTTATC GACCGGCTTG GCATACCGGG CGCCGCTTGG
GCCTGGGATC TGCGTGTCCT TGCGGATACC CTGCTCTTGT TCTGGGCGGC GCAGACTACC
TCCGGCTTGA ACCGCACCAT GGCTGGTATC CTGCCCATTA CCGGGGCCTT CGTTATTGCC
TTTGAAATGC CTTATGACTC TGCCCTGTAT GTGGGGATTT CGCTACTGTT GGCAGGTGCA
AGCATTGGCT GGTCCATTGC CAGCATTCCT CAAGATCAAC GCACCACCCT CTCGCGTCGC
CTTTTGGCGC GAACGCCTCC TGTCAACTCA ACGGTCTCGC AGGAAAAACA TGGATCATGA
 
Protein sequence
MTAPHPRIAR STLINLVGAA IPAALLLITV PIYLHLIGEA RYGVLAIVWL LLGYFGVFDF 
GFGRAVANRI AALHDATAEE RQGIFWTGLA ISAVTGLIGG AILYLLGDWL FAHVFHISGS
LRIEAENAMP WLALALPLAI IISLLAGALE GRQAFLALNG AQIFGTVLYQ LFPLVVAYAG
WITLPYLISA AIVGRLLSVL LLFALSYRHV PLSPRPRFAL HQVKSLLHYG GWITVTGLVG
PLLTVFDRFL IGAKVGMVAV TAYTVPYNLV MRLSILPGSL QTALFPRFAM VDPTEAKVLA
ARAILSIGAI MTPIVVIGLL LIKPFLILWV GAALAEKTAP VGQILLVGIW INTLAIIPFT
YLQGRGRPDL PAKFHVLELL PYVAILWVLI DRLGIPGAAW AWDLRVLADT LLLFWAAQTT
SGLNRTMAGI LPITGAFVIA FEMPYDSALY VGISLLLAGA SIGWSIASIP QDQRTTLSRR
LLARTPPVNS TVSQEKHGS